Yersinia pestis Nepal516 (biovar Antiqua): YPN_0314
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Entry
YPN_0314 CDS
T00370
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
ypn
Yersinia pestis Nepal516 (biovar Antiqua)
Brite
KEGG Orthology (KO) [BR:
ypn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ypn03400
]
YPN_0314
DNA repair and recombination proteins [BR:
ypn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
YPN_0314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
GvpD_P-loop
RecA
AAA_22
SLFN-g3_helicase
AAA_14
AAA_16
Rad51
ABC_tran
NTPase_1
nSTAND3
DUF7125
AAA
AAA_24
AAA_5
cobW
Zeta_toxin
AAA_29
DZR
Viral_helicase1
Herpes_Helicase
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
ABG16646
UniProt:
A0A0H2YFM9
LinkDB
All DBs
Position
383032..384414
Genome browser
AA seq
460 aa
AA seq
DB search
MAKAPKRAFVCNECGADYPRWQGQCSACNAWNTITEVRLAAVASSSRNDRFVGYAGDAGV
SRVQKLSDISLEELPRFSTGFLEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQTLCKLS
ENMKTLYVTGEESLQQVAMRAHRLGLPTAGLNMLSETSIEQICLIAEQEQPRLMVIDSIQ
VMHMADIQSSPGSVAQVRETAAYLTRFAKTRGVAIVMVGHVTKDGSLAGPKVLEHCIDCS
VMLDGDGDSRFRTLRSHKNRFGAVNELGVFAMTEQGLREVSNPSAIFLSRGDEVTAGSSV
MVVWEGTRPLLVEIQALVDHSMMSNPRRVAVGLEQNRLAILLAVLHRHGGLQMSDQDVFV
NVVGGVKVTETSADLALLMSLVSSLRDRPLPQDLVVFGEVGLAGEIRPVPSGQERISEAA
KHGFKRAIVPYANMPKKPLPNMQVFGVKKLADALAVLEDL
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagcacccaaacgggcgtttgtctgtaatgaatgtggcgcagattatccgcgt
tggcaggggcaatgcagtgcctgtaacgcctggaataccattaccgaagtcaggctggcg
gcggtagcgtcatcgtctcgtaatgaccgttttgttggttatgctggcgatgccggtgtt
agccgggtacagaagctgtccgatattagtctggaggagttgccgcgcttctcaaccggc
tttctcgagtttgatcgggtgctgggcggcggggtggtaccgggcagtgccattttgatt
ggcggtaaccccggcgcaggcaaaagtactctattgctgcaaaccctctgcaaactgtcg
gaaaacatgaaaaccctgtatgtcactggcgaagagtcgttgcagcaggtcgccatgcgc
gcgcaccgtctgggcctgcccacggcggggctgaatatgttgtcggaaaccagtatcgag
cagatttgcctgatagcagagcaagaacagccacggctgatggtcatcgactccattcaa
gtaatgcatatggcggatatccaatcatcgccgggcagtgtggcgcaagtgcgcgaaact
gcggcttatctgactcgttttgctaaaacccggggtgtcgccatcgtgatggtggggcat
gtgaccaaagacggttcgctggccgggccgaaagtattagaacactgtattgactgctcc
gtgatgcttgatggtgatggcgactcacgctttcgtactctgcgtagccacaaaaaccgc
tttggtgcggttaacgaactgggtgtgtttgccatgaccgagcaaggtctacgggaagtc
agtaatccatcggcgatctttttgagccgtggcgatgaagtgaccgcaggcagttcagtg
atggtggtgtgggaagggactcgcccattgctggtggagatccaagcgctggtagatcat
tcgatgatgtcgaatccacgccgggtcgctgtcgggctggaacaaaaccgcttggccatc
ttattggctgttttacaccgccacggtggtttgcagatgtcagatcaagacgtgttcgtt
aacgtcgttggcggggtgaaagtcactgaaaccagcgctgatctggcattgttgatgtcg
ctggtctccagtctgcgtgaccgcccattaccgcaagatttagtggtgtttggcgaggtg
gggctggccggtgaaatccgcccggtaccaagtggtcaggagcgtatctccgaggcggca
aagcacggttttaaacgtgccatcgtgccttatgccaatatgcctaaaaaaccgctaccc
aatatgcaggttttcggggtaaaaaaactggccgatgcgttggctgttttagaagattta
taa
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