| Entry | T00370 |
| Org code | ypn |
| Name | Yersinia pestis Nepal516 (biovar Antiqua) |
| Annotation | yes |
| Taxonomy | TAX: 377628 |
| Lineage | Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Yersinia; Yersinia pseudotuberculosis complex; Yersinia pestis |
| Brite | KEGG organisms [BR:br08601]
KEGG organisms in the NCBI taxonomy [BR:br08610]
KEGG organisms in taxonomic ranks [BR:br08611] |
| Data source | GenBank (Assembly: GCA_000013805.1 Complete Genome)
BioProject: 16646 |
| Original DB | JGI |
| Keywords | Human pathogen, Animal pathogen |
| Disease | H00297 Plague |
| Comment | Isolated from a human infection in Nepal, possibly from a 1967 outbreak of pneumonic plague.
|
| Chromosome | Circular |
| Sequence | GB: CP000305 |
| Length | 4534590 |
| Plasmid | pMT; Circular |
| Sequence | GB: CP000306 |
| Length | 100918 |
| Plasmid | pPCP; Circular |
| Sequence | GB: CP000307 |
| Length | 10778 |
| Statistics | Number of nucleotides: 4646286
Number of protein genes: 4094
Number of RNA genes: 107
|
| Created | 2006 |
| Reference | PMID: 16740952 |
| Authors | Chain PS, Hu P, Malfatti SA, Radnedge L, Larimer F, Vergez LM, Worsham P, Chu MC, Andersen GL. |
| Title | Complete genome sequence of Yersinia pestis strains Antiqua and Nepal516: evidence of gene reduction in an emerging pathogen. |
| Journal | J Bacteriol 188:4453-63 (2006)
DOI: 10.1128/JB.00124-06 |
Yersinia pestis Nepal516 (biovar Antiqua)