KEGG   Yersinia pestis Nepal516 (biovar Antiqua): YPN_0883
Entry
YPN_0883          CDS       T00370                                 
Name
(GenBank) Exodeoxyribonuclease I subunit D
  KO
K03547  DNA repair protein SbcD/Mre11
Organism
ypn  Yersinia pestis Nepal516 (biovar Antiqua)
Brite
KEGG Orthology (KO) [BR:ypn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ypn03400]
    YPN_0883
DNA repair and recombination proteins [BR:ypn03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     YPN_0883
    Archaeal homologous recombinant proteins
     YPN_0883
SSDB
Motif
Pfam: SbcD_C Metallophos Metallophos_2 FBPase_2 Terminase_3 Metallophos_3
Other DBs
NCBI-ProteinID: ABG17215
UniProt: A0A0H2YH41
LinkDB
Position
complement(1032849..1034093)
AA seq 414 aa
MRIIHTSDWHLGQYFFTKSRAAEHQAFLHWLIEQIKEHQVDALIVAGDIFDTGAPPSYAR
ELYNRFIVELQPTACQLVVLGGNHDSVATLNESRDLLSYLNTSVISCASRDLKQQVIILK
NRQQQPAAVLCAIPFLRPRDLVTSQAGESGDQKQLALQEAIAGHYQTLYQRALELRSQLG
LPLPIIATGHLTTVGVTTTDSVRDIYIGTLDAFPAQAFPPADYIALGHIHRAQQVAKTEH
IRYSGSPIALSFDELSKEKSVYLVEFDQQNLSSVTPLFIPQFQPMQLIKGDLRQIEQQLA
AFAGHEGLPVWLDIEVATQDYLTDIQRRIQALAANLPVEVVLLRRSKEQRNNSIHRQEKE
TLNELTVSDVFERRLALEADLPEPRQQRMRQMFNYVVDEIAQDGSNGVAEEPAQ
NT seq 1245 nt   +upstreamnt  +downstreamnt
atgcgtattattcatacctctgactggcatttggggcagtattttttcaccaaaagccgt
gctgctgaacatcaggcatttctgcactggttgattgagcagatcaaagaacaccaggtt
gatgcgctgattgtcgcaggggatatttttgataccggtgccccgcccagctatgcccgt
gagctctataaccgttttattgttgagctccagcctaccgcctgtcaattagtggtactg
ggtggcaaccatgattcggtagccacactgaatgaatcacgagatttactttcatacctg
aatacctcggtaatctcatgtgccagtcgtgatctgaaacaacaagtgattatcctgaaa
aatagacagcagcaacccgcagcggtgctatgcgccattccgtttttacggccccgtgat
ctggtgaccagtcaagcgggtgagtctggtgaccagaaacaactggcattacaagaagct
attgctggccactatcaaacgttatatcaacgcgccctagaactgcgatctcagcttggc
ttgcctctgcccattatcgccaccgggcacctgaccaccgtgggtgtgacaaccacagac
tcagtacgagacatttatattggtacactagatgcctttccggctcaggcttttccaccc
gcggattacattgcccttggtcatatccatcgcgctcaacaggtcgctaaaactgaacat
atccgctacagcggctcacctatagcgctcagttttgatgaactaagcaaagagaaaagt
gtgtatttggtggagtttgaccagcaaaatctgtcatcagttaccccactcttcattcca
caatttcaaccgatgcaattgatcaaaggtgatttgcgccaaatagagcagcaattagcg
gcatttgctggccatgaaggcttacccgtgtggttggatatagaagtggcaacccaagac
tatctcaccgatattcaaagacggatccaggcactggcagcgaacttgcccgttgaagtg
gtattactacgccgtagcaaagaacaacgtaataacagcatccaccggcaggaaaaagaa
acgctaaacgaattgaccgtcagtgacgtatttgaacgtaggctggcactggaggcagat
ttacccgagcctcgccagcagcgaatgcgccaaatgttcaattacgtggttgatgaaata
gcacaagatggcagtaacggtgtggcggaggagccagcccaatga

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