Yersinia pestis Nepal516 (biovar Antiqua): YPN_0883
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Entry
YPN_0883 CDS
T00370
Name
(GenBank) Exodeoxyribonuclease I subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
ypn
Yersinia pestis Nepal516 (biovar Antiqua)
Brite
KEGG Orthology (KO) [BR:
ypn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ypn03400
]
YPN_0883
DNA repair and recombination proteins [BR:
ypn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
YPN_0883
Archaeal homologous recombinant proteins
YPN_0883
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
FBPase_2
Terminase_3
Metallophos_3
Motif
Other DBs
NCBI-ProteinID:
ABG17215
UniProt:
A0A0H2YH41
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Position
complement(1032849..1034093)
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AA seq
414 aa
AA seq
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MRIIHTSDWHLGQYFFTKSRAAEHQAFLHWLIEQIKEHQVDALIVAGDIFDTGAPPSYAR
ELYNRFIVELQPTACQLVVLGGNHDSVATLNESRDLLSYLNTSVISCASRDLKQQVIILK
NRQQQPAAVLCAIPFLRPRDLVTSQAGESGDQKQLALQEAIAGHYQTLYQRALELRSQLG
LPLPIIATGHLTTVGVTTTDSVRDIYIGTLDAFPAQAFPPADYIALGHIHRAQQVAKTEH
IRYSGSPIALSFDELSKEKSVYLVEFDQQNLSSVTPLFIPQFQPMQLIKGDLRQIEQQLA
AFAGHEGLPVWLDIEVATQDYLTDIQRRIQALAANLPVEVVLLRRSKEQRNNSIHRQEKE
TLNELTVSDVFERRLALEADLPEPRQQRMRQMFNYVVDEIAQDGSNGVAEEPAQ
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgcgtattattcatacctctgactggcatttggggcagtattttttcaccaaaagccgt
gctgctgaacatcaggcatttctgcactggttgattgagcagatcaaagaacaccaggtt
gatgcgctgattgtcgcaggggatatttttgataccggtgccccgcccagctatgcccgt
gagctctataaccgttttattgttgagctccagcctaccgcctgtcaattagtggtactg
ggtggcaaccatgattcggtagccacactgaatgaatcacgagatttactttcatacctg
aatacctcggtaatctcatgtgccagtcgtgatctgaaacaacaagtgattatcctgaaa
aatagacagcagcaacccgcagcggtgctatgcgccattccgtttttacggccccgtgat
ctggtgaccagtcaagcgggtgagtctggtgaccagaaacaactggcattacaagaagct
attgctggccactatcaaacgttatatcaacgcgccctagaactgcgatctcagcttggc
ttgcctctgcccattatcgccaccgggcacctgaccaccgtgggtgtgacaaccacagac
tcagtacgagacatttatattggtacactagatgcctttccggctcaggcttttccaccc
gcggattacattgcccttggtcatatccatcgcgctcaacaggtcgctaaaactgaacat
atccgctacagcggctcacctatagcgctcagttttgatgaactaagcaaagagaaaagt
gtgtatttggtggagtttgaccagcaaaatctgtcatcagttaccccactcttcattcca
caatttcaaccgatgcaattgatcaaaggtgatttgcgccaaatagagcagcaattagcg
gcatttgctggccatgaaggcttacccgtgtggttggatatagaagtggcaacccaagac
tatctcaccgatattcaaagacggatccaggcactggcagcgaacttgcccgttgaagtg
gtattactacgccgtagcaaagaacaacgtaataacagcatccaccggcaggaaaaagaa
acgctaaacgaattgaccgtcagtgacgtatttgaacgtaggctggcactggaggcagat
ttacccgagcctcgccagcagcgaatgcgccaaatgttcaattacgtggttgatgaaata
gcacaagatggcagtaacggtgtggcggaggagccagcccaatga
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