Yersinia pestis Nepal516 (biovar Antiqua): YPN_0911
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Entry
YPN_0911 CDS
T00370
Name
(GenBank) 1-Deoxy-D-xylulose-5-phosphate synthase
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
ypn
Yersinia pestis Nepal516 (biovar Antiqua)
Pathway
ypn00730
Thiamine metabolism
ypn00900
Terpenoid backbone biosynthesis
ypn01100
Metabolic pathways
ypn01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ypn00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
YPN_0911
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
YPN_0911
Enzymes [BR:
ypn01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
YPN_0911
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Gene cluster
GFIT
Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
Transketolase_N
TPP_enzyme_C
E1_dh
PFOR_II
GpA_nuclease
Motif
Other DBs
NCBI-ProteinID:
ABG17243
UniProt:
Q1CL87
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All DBs
Position
complement(1061973..1063832)
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AA seq
619 aa
AA seq
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MSLDIAKYPTLALAENPEELRMLPKESLPKLCDELRQYLLTCVSRSSGHFASGLGVVELT
VALHYVYNTPFDHLIWDVGHQAYPHKILTGRRDRISTIRQKDGLHPFPWRGESEYDVLSV
GHSSTSISAGLGMAVAAEREGKGRRTVCVIGDGAITAGMAFEAMSHAGDIHSDMLVILND
NGMSISENVGGLNNHLAQLLSGKLYASLREGGKKAFSALPPIKDLLKRTEEHLKGMVVPS
TLFEELGFNYIGPVDGHDVHTLTQTLKNMRDLKSPQLLHIMTKKGKGYAPAEKDPIGWHA
VPKFDPASGTLPKSQSSLPTYSKIFGEWLCETAAKDSKLMAVTPAMREGSGMVRFSREYP
QQYFDVAIAEQHAVTFAAGLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPVLFAIDR
GGLVGADGQTHQGAFDLSFMRCIPNMVIMAPSDENECRQMLYTGYHHNGPAAVRYPRGNG
TSAVLEPLEMLPIGKGVLRREGEKIAILCFGTLLAQAQLAAENLNATLVDMRFVKPLDEE
LVLEMAAKHQVLVTVEENAIMGGAGSGVNELLMAKRRWVPVLNIGLPDLFVPQGEQDEMR
SELGLDAAGIQRQIEAWLA
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgagtcttgatatagccaaatacccgacattggcactagcggagaacccagaagaactg
cgcatgctgccaaaagaaagcttgccgaagttatgtgatgaactccggcagtatttgctc
acctgtgtcagccgatccagcgggcattttgcttccgggttaggcgtagtcgaactgact
gtcgctttacattacgtttataatacgccgtttgatcatttgatatgggacgtaggtcat
caggcttatccgcacaaaatattgaccggccgccgtgatcgaatctctactattcgtcaa
aaagatggtttgcacccttttccatggcgcggagagagtgaatacgacgtgctttctgtt
ggtcactcctctacatcgatcagcgcgggtctgggtatggcggttgctgccgagcgggaa
ggtaaagggcgacgtaccgtttgcgttatcggtgatggtgctatcaccgcaggtatggct
tttgaagcaatgagtcatgccggagatattcactcagacatgctggttatcctcaatgat
aatggaatgtctatttcagaaaatgtaggtggcctgaacaaccatttggctcagctatta
tctggaaaactctatgccagcctacgtgaaggcggtaaaaaagcattttctgccttacca
ccaatcaaagatctgctgaaacgaaccgaagagcatctgaaagggatggtagtccccagt
acgttgtttgaagagttaggttttaattatattggtcccgttgatgggcatgatgtacac
acgttgacgcaaacgctaaaaaatatgcgcgacctgaaaagtccacaacttctgcacatc
atgactaaaaagggcaaaggctatgctccggcagaaaaggatccaatcggttggcatgcc
gtacctaagtttgatcccgcctccggcaccttgcctaaaagccagagcagcctccccact
tactccaaaatatttggcgaatggttatgcgaaaccgcagccaaagatagcaaattaatg
gcagtgacaccggcgatgcgtgaaggatccggcatggtgcgtttctcgcgcgaatatccg
caacaatatttcgatgtcgccatcgctgaacaacatgcagtgacctttgccgcaggcctg
gctattggtggctacaagcctgtggttgccatctattcgactttcttgcaacgcgcctat
gatcagttgatccatgatgttgctatccaaaatttgcccgtgctctttgccattgaccgt
ggcggtttggtcggtgctgatgggcagactcaccaaggtgcattcgatctttcatttatg
cgctgtattccaaacatggtcattatggcaccaagtgatgagaatgagtgccgtcagatg
ctatacaccggctatcaccataatggacctgccgcagtacgttacccacgaggtaatggt
acgagcgcggtgctggagccattggagatgttgccgatcggcaaaggggtactacgccgt
gaaggtgagaagattgccatcctttgctttggtacgttacttgctcaggcacagcttgcc
gcagaaaacctcaatgccacgctggtggatatgcgtttcgtgaaaccgctagatgaagaa
ttggtattggaaatggcagcaaaacatcaggtattagtgactgtcgaagaaaacgccatc
atggggggggcgggtagcggtgtgaatgagctattaatggcaaaacggcgatgggtccca
gtactcaatattggtttacccgatctatttgtgccacaaggtgagcaagacgaaatgcga
tctgaactcggtttagatgcggcgggtatacagcgtcaaattgaagcttggctagcttaa
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