Yersinia pestis Nepal516 (biovar Antiqua): YPN_0936
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Entry
YPN_0936 CDS
T00370
Name
(GenBank) bacterial nucleoid protein HU beta subunit
KO
K03530
DNA-binding protein HU-beta
Organism
ypn
Yersinia pestis Nepal516 (biovar Antiqua)
Brite
KEGG Orthology (KO) [BR:
ypn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ypn03032
]
YPN_0936
03036 Chromosome and associated proteins [BR:
ypn03036
]
YPN_0936
03400 DNA repair and recombination proteins [BR:
ypn03400
]
YPN_0936
DNA replication proteins [BR:
ypn03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
YPN_0936
Chromosome and associated proteins [BR:
ypn03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
YPN_0936
DNA repair and recombination proteins [BR:
ypn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
YPN_0936
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
ABG17268
UniProt:
A0A0H2YF04
LinkDB
All DBs
Position
1089265..1089537
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSQLIDKIAAGADISKAAAGRALDAIITSVTESLKEGDDVALVGFGTFAVRERSARTG
RNPQTGKEISIPAAKVPGFRAGKGLKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaataagtcacaactgatagacaaaattgccgcaggtgctgatatttctaaagcggcc
gctgggcgtgcgttagatgcaattattacttctgttactgaatccttgaaagaaggggat
gatgtggctctggttggttttggtacttttgcagtacgtgagcgttctgcacgtactggc
cgtaacccgcagacaggtaaagaaattagtattccagccgctaaagtaccgggttttcgt
gccggtaaaggcctgaaagatgcagtaaactga
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