Yersinia pestis Nepal516 (biovar Antiqua): YPN_1888
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Entry
YPN_1888 CDS
T00370
Name
(GenBank) threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
ypn
Yersinia pestis Nepal516 (biovar Antiqua)
Pathway
ypn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ypn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
YPN_1888
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ypn01007
]
YPN_1888
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ypn03016
]
YPN_1888
Enzymes [BR:
ypn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
YPN_1888
Amino acid related enzymes [BR:
ypn01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
YPN_1888
Transfer RNA biogenesis [BR:
ypn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
YPN_1888
Prokaryotic type
YPN_1888
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_SAD
TGS
RNA_pol_Rpb1_7
Motif
Other DBs
NCBI-ProteinID:
ABG18217
UniProt:
Q1CIG3
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All DBs
Position
complement(2131657..2133585)
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AA seq
642 aa
AA seq
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MPVITLPDGSQRHYDHAVSVLDVALDIGPGLAKACIAGRVNGELVDASDLIESDAQLAII
TAKDAEGLEILRHSCAHLLGHAIKQLWPDTKMAIGPVIDNGFYYDVDIEHTLTQEDLALL
EKRMHELADKDYDVIKKKVSWQEARDTFAARGEDYKVAILDENISRDDRPGLYHHEEYVD
MCRGPHVPNMRFCHHFKLQKTSGAYWRGDSKNKMLQRIYGTAWGDKKQLNAYLQRLEEAA
KRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELETFVRMKLKEYQYQEVKGPFMMD
RVLWEKTGHWENYAEHMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGS
CHRNEPSGALHGLMRVRGFTQDDAHVFCTEEQVRDEVNSCIKMVYDMYSTFGFEKIVVKL
STRPEKRIGSDELWTRAEDDLAAALTENGIPFDYQPGEGAFYGPKIEFTLHDCLDRAWQC
GTVQLDFSLPGRLSASYIGENNDRQVPVMIHRAILGSMERFIGILTEEYAGFFPTWLAPV
QVVVMNITDSQSDYVQQVTKKLQDAGIRAKADLRNEKIGFKIREHTLRRVPYMLVCGDKE
VESGKIAVRTRRGKDLGSLDVNVVVDQLLAEIRSRSLHQLEE
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgcctgttattacccttcctgatggcagtcagcgtcattatgaccatgctgtttctgtc
cttgatgttgctcttgatatcggccctggcttagcaaaagcctgcattgccggtcgggtg
aatggtgagctggtggatgccagtgatctgattgagtccgatgctcagttggcgattatc
accgccaaagatgctgaaggtttggagattcttcgccattcctgcgcgcatttgttggga
cacgctatcaagcaactctggccagataccaaaatggctattggtccagttattgacaac
ggtttttattacgatgttgatatcgaacatactctgacgcaggaagacttggcactgctg
gaaaagcggatgcacgagcttgccgataaagattatgacgtgatcaagaaaaaagtcagt
tggcaagaagcccgtgatacttttgctgctcggggcgaagattataaagtggctattctt
gatgagaatatcagtcgcgatgatcgtccgggcttgtatcaccatgaagaatacgttgat
atgtgccgtggtccgcacgtaccgaatatgcgtttctgccatcactttaaattgcagaaa
acttccggtgcttattggcgtggcgacagcaaaaataaaatgctgcaacgtatctatggc
acagcttggggtgataagaagcaactgaatgcttatctgcaacgcttggaagaggcggcg
aaacgcgaccatcgtaagattggtaagcaactcgatctctaccacatgcaggaagaagca
ccaggcatggtgttctggcacaacgatggttggacaattttccgcgaattggaaaccttt
gtgcgtatgaagctcaaagagtaccagtatcaggaagtgaaaggtccatttatgatggat
cgcgtactgtgggaaaaaacggggcattgggaaaactacgccgagcatatgttcacgacc
tcttcggagaatcgtgagtactgcattaagccaatgaactgccccggacacgtacaaatt
ttcaatcaaggattgaaatcttaccgtgacctgccgctgcgtatggctgaatttggtagt
tgccaccgtaatgaaccttcgggcgccctacatggcttaatgcgtgttcgtggctttact
caagatgatgcccatgtcttctgtaccgaagagcaagtccgtgatgaagtaaacagttgc
atcaagatggtgtacgacatgtacagcacctttggcttcgagaagattgtcgtcaaactc
tctacccgccctgaaaagcgtattggcagtgatgagttatggacacgtgccgaagacgat
ttggctgctgcgctgactgaaaatggtattccgtttgattatcagccaggcgaaggggcg
ttctatggcccgaaaattgaatttaccttgcatgattgtttggatcgtgcgtggcagtgt
ggtaccgtacagctcgatttctcattaccgggccgcttaagtgcgtcttacatcggcgaa
aacaatgatcgtcaggtgccggtaatgattcaccgggcaattttgggttcaatggagcgc
ttcatcggtatcttaaccgaagaatatgcgggctttttcccaacttggttagctccggta
caagtcgtggtgatgaatatcaccgatagccagtctgattatgttcagcaagtaaccaaa
aaactgcaagatgcgggtattagagcaaaagcagacttgagaaatgagaagattggcttt
aaaattcgtgaacatacgttgcgtcgggttccatatatgttggtctgtggcgataaagaa
gtcgaatcaggcaaaattgccgttcgtactcgccgcggtaaagacttaggaagtttagac
gtcaacgtggtcgtagaccagctgctagcagaaattcgcagccgtagtcttcatcaactg
gaggaataa
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