Yersinia pestis Nepal516 (biovar Antiqua): YPN_3087
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Entry
YPN_3087 CDS
T00370
Name
(GenBank) lysyl-tRNA synthetase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
ypn
Yersinia pestis Nepal516 (biovar Antiqua)
Pathway
ypn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ypn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
YPN_3087
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ypn01007
]
YPN_3087
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ypn03016
]
YPN_3087
Enzymes [BR:
ypn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
YPN_3087
Amino acid related enzymes [BR:
ypn01007
]
Aminoacyl-tRNA synthetase
Class II (A)
YPN_3087
Transfer RNA biogenesis [BR:
ypn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
YPN_3087
Prokaryotic type
Other AARSs
YPN_3087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
ABG19414
UniProt:
Q1CF16
LinkDB
All DBs
Position
complement(3469599..3471116)
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AA seq
505 aa
AA seq
DB search
MSEQKPQVAEQAQELNSELQARREKLAVLRGKGIAFPNDFRRENLSDQLHAEFDSKENEE
LEALNIDVTVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLPEGVYNEEFKKWDLGD
ILGARGKLFKTKTGELSIHCSELRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANDES
RHTFKVRSQVMSGIRSFMVEKGFMEVETPMMQVIPGGASARPFVTHHNALDIDMYLRIAP
ELYLKRLVVGGFERVFEINRNFRNEGVSPRHNPEFTMMELYMAYADYKDLIVLTEELFRT
LTETILGSSVVQYGEQTFDFGKPFAKLTMKEAICKYRPETNVADLDDMDKAVAIAESLGI
KVEKSWGLGRIQCEIFEETAESHLIQPTFITEYPAEVSPLARRNDDNPFITDRFEFFIGG
REIGNGFSELNDAEDQAQRFADQVSAKEAGDDEAMFYDEDYITALEHGLPPTAGLGIGID
RMVMLFTNSHTIRDVILFPAMRPVK
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagcaaaaaccacaagtcgctgagcaagcgcaagaactcaatagtgagttacaa
gcccgtcgagaaaaactggctgtcttacggggaaagggaattgcattccctaatgatttc
cgccgtgagaacctttccgaccagttgcatgccgagtttgacagtaaagagaatgaagag
ttagaagcactgaatatcgacgtaaccgttgctggccgtatgatgacccgccgtatcatg
ggtaaagcatcatttgtgactctgcaagatgttggtggccgtatccagttgtacgtttcc
cgtgatgacctaccggaaggcgtttataacgaagaattcaaaaagtgggacctgggcgat
atcctgggtgcgcgcggtaaactgtttaaaaccaaaaccggtgagctgtcgatccactgt
agcgaactgcgtctgttgaccaaggctctgcgtccattgccagataaattccatggctta
gctgaccaggaaacccgttaccgccagcgttatttggatctgattgctaacgacgagtct
cgtcatactttcaaagtccgttcgcaagtgatgtccggtatccgtagcttcatggttgaa
aaaggcttcatggaagtcgaaacgccaatgatgcaagtgatccctggcggcgcttccgca
cgtccgtttgtcacgcatcacaatgcgttggatatcgatatgtatttgcgtatcgcgcca
gagctgtatctgaaacgtctggtcgtggggggcttcgaacgtgtgttcgaaatcaaccgt
aacttccgcaacgaaggggtttcgccacgtcataacccagagttcaccatgatggaactc
tatatggcttatgcggactataaagacctgatcgtcttgacggaagagctattccgcact
ctgaccgaaaccatattggggagcagtgtggtgcaatatggcgaacagacttttgatttc
ggtaagccttttgccaaattgaccatgaaagaagctatttgtaaatatcgtcctgaaacc
aatgtcgcggatttagacgatatggataaagccgtcgcaattgccgaatcattgggtatc
aaggttgagaagagctggggcctgggtcgtattcaatgtgaaatctttgaagagaccgca
gaaagtcatcttatccagccaacgttcatcacagaatatccagccgaggtttctccgcta
gcacgccgtaatgacgataatccatttatcactgaccgctttgaattcttcatcggtggc
cgtgaaattggtaatggcttctctgagttgaacgatgccgaagaccaggcgcagcgtttc
gccgatcaggtaagtgctaaagaagctggcgatgatgaagcgatgttctacgatgaagac
tatatcactgcattggaacatggcttaccaccaaccgcagggctaggtattggtattgac
cgtatggttatgttgtttaccaatagccataccatccgtgatgtcattttattcccagcg
atgcgcccggtaaaataa
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