Yersinia pestis Nepal516 (biovar Antiqua): YPN_3227
Help
Entry
YPN_3227 CDS
T00370
Name
(GenBank) antigenic leucine-rich repeat protein
KO
K23946
E3 ubiquitin-protein ligase SlrP [EC:
2.3.2.27
]
Organism
ypn
Yersinia pestis Nepal516 (biovar Antiqua)
Brite
Enzymes [BR:
ypn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
YPN_3227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NEL
LRR_TTSS
LRR_4
FNIP
LRR_LRWD1
Motif
Other DBs
NCBI-ProteinID:
ABG19554
UniProt:
A0A0H2YMD3
LinkDB
All DBs
Position
3669702..3671582
Genome browser
AA seq
626 aa
AA seq
DB search
MNLSNITSNVSMPNIEPDREIHSARTSTAALTPADYYAIWEKWESEAIPGTDEQRRFAVE
CMKDCLEKNTYHLCLRDLNLASLPDILPPCNELDLMGNKLTELPATLPDNLQKLNASFNQ
LRTLPDTLPASLLSLNVYGNELERLPESLPEGLKELDVNDNESLQLPNRLPPNLESLGIA
SCGLTELPTLPNSLKRLDADSNQLRTLPDTLPISLLNLSVTSNQLTQLPETLPASLSFLM
VLSNRLTKLPENLPGSLRCISAEYNQLSQLPDLARLPQNCEILLEGNPLSTSTLQVLQHL
RINPYYQGPRINWSELDNLPPASLRNIVATWLPPEQQNRLAGDWANIETEANSAAFSVFL
HRLATTQNANNIPEFKQQIAAWLLQLADSPTLREQTFLIAQEASATCEDRITLTHNDMQK
AVMLHEVEKGKYDEKLPELMARGREMFRLEQLENIAREKVKILKTLNVNSVDDIEVYLAY
QVKLLNSLQLSSVNKEMRFFGVSHVTADDLLSAETRVKTAENQDFSRWLSQWSPWKSVVQ
RIEPERYAAAVEKQYHALENIYPDKLAAELAANGMTGDVDANRIVGKRINDELMGEIDMA
LTHEVLSAKGASSLLDNLWMEYLISP
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgaatctatcaaatataacgtcgaacgtgtcaatgccgaacatcgagccagaccgtgaa
atccattctgcacggacatcaacagcagccttaactccggctgactattatgcaatatgg
gaaaaatgggaaagcgaagcaatacctggtactgacgaacaacggcgcttcgccgtggaa
tgcatgaaagattgcctggaaaaaaatacctatcacctctgtctccgtgatcttaatttg
gcctcattaccagacattctgccgccgtgtaacgaactggatctcatgggtaataagtta
actgagttgccagcaacactgcccgacaacctgcaaaaactgaatgcttcttttaatcaa
ctgcgtacattaccggatacattaccggcctcgctgttatctctaaatgtgtacggaaat
gaactagaacggctccctgagtcgctacctgaagggctaaaagaattagacgttaatgat
aatgagtcactgcaactcccaaatcgcttgcccccgaatctggagtctcttggtattgca
agctgtggcttaactgaactgcctacactgccgaacagtttgaaaagactggatgcggat
agtaatcaactgcgcacattgcccgatacattgccaatatcgctattaaatctaagtgtg
accagtaatcaactcacacaactccccgagacattgcccgcctcgctgtcatttttaatg
gtattgagcaataggctcacaaaactgccagaaaatttacccggtagtttaaggtgtatc
agcgctgaatataatcaattatcccaacttcccgacctggcccgtctgccccaaaactgt
gaaattctcttagaaggtaaccctctgtctaccagcacactgcaggtactacaacatctc
cgtattaacccgtattatcaggggccacggattaactggagcgaattagacaatctacca
ccagcgagtctccgtaacattgttgccacctggttgccgccggaacaacaaaataggttg
gcaggagattgggcaaatatcgagacagaagctaactcagccgcttttagcgtttttctt
caccgtttggctaccactcaaaacgcaaataatatccctgaatttaaacaacaaattgcg
gcatggttgttgcaattggctgactcacctactctacgtgagcagacctttcttattgct
caggaagcaagcgcgacctgtgaagaccgcattaccttgacgcataacgatatgcaaaag
gcagtcatgctccatgaggtcgaaaaggggaaatatgatgaaaaactacctgaactgatg
gcgcgtggccgagagatgttccgtctggaacaacttgagaatattgcccgcgaaaaagta
aaaatactaaaaacactgaatgtaaattcagtcgatgatatcgaagtctatctcgcctat
caggtcaaactgctcaattccttacagctctcctcggtaaacaaagaaatgcgcttcttt
ggcgtatcacatgtgacagcagacgatttactgagcgcagaaacccgggtgaaaactgcg
gaaaaccaagatttctcgcgctggctatcacaatggtctccgtggaaaagcgtggtgcaa
cgtattgagcctgaacgttatgctgctgcggtcgaaaagcagtaccacgcactggagaat
atttacccagataaactggcggctgaattggcagccaacgggatgacgggcgatgtggat
gccaaccgcattgtcggcaaaagaatcaacgatgagctcatgggggagatcgatatggcc
ctaactcatgaggttctctctgccaaaggagcctcctccttattagataatctgtggatg
gaatatctaatctcgccttga
DBGET
integrated database retrieval system
