Yersinia pestis Nepal516 (biovar Antiqua): YPN_3250
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Entry
YPN_3250 CDS
T00370
Name
(GenBank) D-Ala-D-Ala peptidase C. Serine peptidase. MEROPS family S13
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
ypn
Yersinia pestis Nepal516 (biovar Antiqua)
Pathway
ypn00550
Peptidoglycan biosynthesis
ypn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ypn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
YPN_3250
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ypn01002
]
YPN_3250
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ypn01011
]
YPN_3250
Enzymes [BR:
ypn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
YPN_3250
Peptidases and inhibitors [BR:
ypn01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
YPN_3250
Peptidoglycan biosynthesis and degradation proteins [BR:
ypn01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
YPN_3250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
ABG19577
UniProt:
A0A0H2YKR2
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All DBs
Position
3709018..3710466
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AA seq
482 aa
AA seq
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MHFSRIVSGLACSIILNISVSNANAAQVENYTQYLPDGANLALMVQKIGASTPAIDYHAQ
QMALPASTQKVLTALAALLQLGPDFRFNTTLESHGTITDGVLRGNLIARFGGDPTLTRQQ
LRNMVATLRKAGVKQIAGDVVIDTSVFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFS
VSLYSAPNPGDTAFIRVASYYPVQMFSEVRTLAKGSPDAQYCELDVVPGELNRFTLTGCL
TQRSEPLPLAFAVQNGASYAGAILKDELKKADIQIDGNLRRQTIPSPAGNVLAQTQSAPL
HDLLKIMLKKSDNMIADTVFRTIGHQRFGVPGTWRSGADAVRQILRQKAGVDLGNSIVVD
GSGLSRHNLISPATMMQVLQYIAQNDQELNFISMLPLAGYDGTLRYRGGLHEAGVNGKVS
AKTGALQGVYNLAGFITTASGQRMAFVQFLSGYAVPPEDQKNRRAPLVRFESRLYKDIYQ
NN
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgcatttttcacgaattgtcagtggattggcctgttctatcatactcaatatcagtgta
tctaatgccaatgcggctcaggtcgagaattacactcagtatctgcctgatggggcaaat
cttgcgttaatggtccaaaaaattggggcatcaacccctgcaatagactatcacgctcag
cagatggcgctaccggccagtacgcaaaaagtactgacggccttggcagcgttattgcaa
ctcggcccagactttcgcttcaatactaccttggaaagccatggcacgattactgatggt
gtgttgcgaggtaatttaattgcccggtttggtggtgacccaacgttaacgcgtcaacaa
ctgcgtaatatggttgcgactctcagaaaagcgggggttaaacagatcgcgggggatgtg
gtgattgatacctcagtattcgccagtcatgacaaagcaccgggttggccatggaacgat
atgacgcaatgctttagtgcgccgcctgctgctgccattgttgatcgcaactgtttttca
gtctctctttacagtgcgcccaatcccggcgataccgcatttatccgtgtcgcgtcttat
tatccggtgcaaatgttcagtgaagtccgcacgttagccaaaggctcacccgatgcacaa
tattgtgagttggacgtcgtgccaggcgaattaaaccggtttacgcttaccggttgtctg
acacagcgcagcgaacctttgccattggcctttgctgtgcaaaatggggccagctacgcc
ggggctatcttaaaagatgaattgaaaaaagctgatattcaaattgatggcaatctgcgc
cgccaaacaataccgagtcctgcgggaaacgtgctagcacagacccaatcagccccctta
catgatttgctgaaaatcatgctgaaaaaatcagacaatatgatcgctgacaccgtcttc
agaaccattggtcatcagcgttttggggttccgggtacttggcgctcgggtgccgatgcc
gttcgccaaattttacgccaaaaagcaggcgttgatcttggtaacagcattgtggtggat
ggatctggcctatcgcgccataatcttatttcaccagcaacaatgatgcaggttttgcaa
tatattgctcaaaatgatcaagagcttaattttatatcaatgctgcctctagcaggatat
gacggtactctacgttatcgtggtggcctgcatgaagcgggggtcaacggtaaagtttca
gcgaagacgggtgcactgcaaggggtttacaatcttgccggtttcattactaccgctagt
gggcaacgtatggcatttgtacaatttttatccggctatgccgttccacctgaagaccaa
aaaaatcgccgagcccccttggttcgatttgagagccgcctctataaagatatttatcag
aataactga
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