Yersinia pestis Nepal516 (biovar Antiqua): YPN_3338
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Entry
YPN_3338 CDS
T00370
Name
(GenBank) transcriptional regulator, AraC family
KO
K02855
AraC family transcriptional regulator, L-rhamnose operon regulatory protein RhaS
Organism
ypn
Yersinia pestis Nepal516 (biovar Antiqua)
Brite
KEGG Orthology (KO) [BR:
ypn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ypn03000
]
YPN_3338
Transcription factors [BR:
ypn03000
]
Prokaryotic type
Helix-turn-helix
AraC family
YPN_3338
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AraC_binding
HTH_18
HTH_AraC
Cupin_2
Motif
Other DBs
NCBI-ProteinID:
ABG19665
UniProt:
Q1CEB5
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Position
complement(3803762..3804583)
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AA seq
273 aa
AA seq
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MTVLHSIDFFSSSSAPVAIEARAPQSAFPEHHHDFYEIVIVEEGAGVHVFNGNPYTLSRG
CVCFVRDHDRHLFESTDDLFLTNVLFRAPDAFRFLSGVGHFLPRECDGVYPSHWRVNGQV
LQQIKCLIACLEHAPKSDQVEDIALHESVFMQLLVKLWQGCQTQVGDDQEGRLYQLLDWL
QNNYSEAVEWPELADRFALPLRTLHRQLKNKTGMTPQRYLTRLHLLQARHQLCYSDNSVT
DIAYLCGFGDSNHFSTLFKREFSQSPRDLRSQL
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgactgtattgcacagtattgattttttctcttccagctcagcacctgtggcgattgaa
gcgcgtgcgccgcaatcggcatttcctgagcatcatcatgatttttatgaaattgttatt
gtagaagagggggctggcgtacatgtttttaatggcaatccctacacattaagtcgcggt
tgcgtctgttttgtccgtgaccatgatcgccatttgtttgaatccacggatgatctgttc
ctcaccaacgtattgtttcgtgccccagatgcctttcgctttttatctggtgtcgggcac
ttcctgcctcgagaatgtgatggggtctatccctcccattggcgggttaacggccaggtt
ttacagcaaataaagtgcttgattgcttgtctggaacacgccccgaaaagtgatcaggtt
gaggatatcgctctgcatgaaagtgtttttatgcagctattggtgaaactgtggcaaggg
tgtcagacgcaggtaggggatgatcaggaagggcggttataccaactgttggattggcta
caaaataactatagcgaggcggttgaatggccggaattggcagatcgctttgcattgcca
ttgcgtactctacatcgccagttaaaaaataagaccgggatgacgccccaacgctatctg
acacgtttgcacttactgcaagcccgtcatcaactgtgttacagcgacaatagcgtcact
gacattgcttatctgtgtggttttggcgacagcaaccacttctcaactttatttaagcgc
gagttttcacagtctccccgtgatttgcgtagccagctttag
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