Yersinia pestis Nepal516 (biovar Antiqua): YPN_3350
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Entry
YPN_3350 CDS
T00370
Name
(GenBank) primary replicative DNA helicase
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
ypn
Yersinia pestis Nepal516 (biovar Antiqua)
Pathway
ypn03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
ypn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
YPN_3350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ypn03032
]
YPN_3350
Enzymes [BR:
ypn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
YPN_3350
DNA replication proteins [BR:
ypn03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
YPN_3350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
AAA_25
ATPase
AAA_33
divDNAB
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ABG19677
UniProt:
A0A0H2YMA1
LinkDB
All DBs
Position
complement(3817694..3819100)
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AA seq
468 aa
AA seq
DB search
MAAKKPTNKMTEPRDRQMEGLKLPPHSLEAEQSVLGGLMLDNERWDNVSERVASKDFFSR
PHRRIFTEMQRLLENSKPIDLITLSESLEQKGDLDSVGGFAYLAELSKNTPSAANIGAYA
DIVRERAVVREMISVANEIADAGYDPQGRSSEDLLDLAESKVFQIAESRASKDEGPKSVD
RILEDTVARIEQLYQRPHDGVTGVSTGFTDLDKKTAGLQKSDLIIVAARPSMGKTTFAMN
LCENAAMMQDKPVLIFSLEMPGDQIMMRMLASLSHVDQTRIRTGQLDDEDWARISSTMGI
LMEKRNMYIDDSSGLTPTEVRSRARRIFREHGGLSLIMIDYLQLMRVPSLSDNRTLEIAE
ISRSLKALAKELQVPVVALSQLNRSLEQRADKRPVNSDLRESGSIEQDADLIMFIYRDEV
YHENSDEKGIAQIILGKQRNGPIGSVRLKFNGQWSRFDNYAGPQYDDE
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgaaaaaaccaaccaacaagatgaccgagccacgagaccgccagatggaaggg
ctgaagcttccgccgcattcgctggaggctgagcagtccgtgttgggcggtttgatgctg
gataacgaacgttgggataacgtatcagaacgtgtcgccagcaaggactttttcagccgc
ccgcatcgccggatctttactgaaatgcagcgcttgttggaaaacagcaagccgatcgac
ttgatcaccttgtccgaatcgctagagcaaaaaggcgatttagactcggtggggggcttt
gcctatctggccgaactatctaaaaacacgccaagtgcggcgaatatcggtgcttatgcc
gatatcgtgcgtgaacgtgccgtggttcgtgaaatgatctctgtggcgaatgagatcgcc
gatgccggctacgatccccaagggcgcagcagtgaagatctgctggatttggcggagtcc
aaagttttccaaatcgcagaaagccgcgccagtaaagatgaaggtcctaaaagcgttgat
cgcattctggaagataccgtcgcccgtattgaacaactttatcagcgcccacacgatggc
gtcactggtgtttcaacgggctttactgatctcgataaaaagaccgctgggctacaaaaa
tccgatctgatcattgtggcggcccgtccatcaatggggaaaaccacctttgcgatgaac
ctgtgtgaaaacgcggcgatgatgcaggacaaaccggtgttgatcttcagcctggagatg
cccggcgatcagatcatgatgcgtatgctggcatccttgtcacatgtcgatcagacccgc
atccgtaccgggcagttagatgatgaggattgggcgcgtatttccagcaccatgggcata
ttgatggaaaaacgcaatatgtacattgatgactcctcgggtctgacaccaacggaagtc
cgctctcgtgcgcggcgtatcttccgtgaacacggggggttgagcctgatcatgatcgac
tacctgcaattaatgcgggtgccgtccttgtcggataaccgtacgctcgaaatcgcggaa
atttcacgctcactgaaagccttggcgaaagagctgcaagtgccggtagtcgcgctttcc
cagcttaaccgtagtttggagcagcgtgccgataagcgcccggttaactccgacttgcgt
gagtccggatcgattgagcaggatgccgacttaatcatgtttatttaccgtgatgaggtt
tatcacgaaaacagtgatgagaaagggatcgcacaaattattttgggtaaacagcgtaat
ggcccgatcggttccgttcgtctgaaatttaacggtcagtggtcacgttttgataactat
gcgggtccgcaatatgacgacgagtag
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