Yersinia pestis Nepal516 (biovar Antiqua): YPN_3921
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Entry
YPN_3921 CDS
T00370
Name
(GenBank) penicillin-binding protein
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
ypn
Yersinia pestis Nepal516 (biovar Antiqua)
Pathway
ypn00550
Peptidoglycan biosynthesis
ypn01100
Metabolic pathways
ypn01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
ypn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
YPN_3921
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
YPN_3921
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ypn01003
]
YPN_3921
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ypn01011
]
YPN_3921
Enzymes [BR:
ypn01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
YPN_3921
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
YPN_3921
Glycosyltransferases [BR:
ypn01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
YPN_3921
Peptidoglycan biosynthesis and degradation proteins [BR:
ypn01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
YPN_3921
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
PCB_OB
Transpeptidase
DUF3502
Motif
Other DBs
NCBI-ProteinID:
ABG20248
UniProt:
A0A0H2YNG8
LinkDB
All DBs
Position
4457342..4459897
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AA seq
851 aa
AA seq
DB search
MKFVKYFLILAVCCILLGAASIFGLYKYIEPQLPDVATLKDIRLQTPMQVYSAEGELIAQ
FGEKRRIPLTLNQIPPEMVHAFIATEDSRFYDHHGVDPVGILRAVSIAMLSGRASQGAST
ITQQLARNFFLSPERTLMRKIKEAFLAIRIEQMLTKDEILELYLNKIYLGYRAYGVGAAA
QVYFGKEVHELTLSQIAMIAGLPKAPSTFNPLYSHDRAVARRNVVLLRMLDEKYITQAQY
DQARSEELVANYHVPQIAFSAPYLAEMVRQEMIKRYGENAYTDGYQVYTTITRKLQLAAV
DSLRANVLAYDMRHGYRGPSNVLWKVGESAWSREQIIDSLKALPVYGPLLPAVVTEADAA
QATAMLADGSNVTLPMVGIRWARPFKSDNAQGPVPKKATDVVQPGQQIWVRKVDDNWWLA
QVPDVNSALVSIDPNNGAIKALVGGFDFNQSKFNRATQALRQVGSNIKPFLYTAAMDKGL
TLATILNDLPITRWDSGAGTDWRPKNSPPTYDGPIRLRQGLGQSKNVVMVRAMRAMGVDY
AAEYLQRFGFPAQNIVHSESLALGSASFTPLQLVRGYAVLANGGYLVDPYFITKITDDVG
NVLFETKPKVVCDNCNLPVIYGDTQRSVVLSDDNIENVATSQNQNASNVPMPELEQVTPA
QTTLNSEQQYAPHVISTPLAFLMRDALNSNIFGEPGWMGTGWRAGRDLKRKDIGGKTGTT
NSSKDAWFSGYGPDTVTSVWIGFDDHRRNLGRSTASGAIPDQISGAEGGAKTAQPAWNDF
MKVALEGLPEKQVPPPPGIVSVVIDKQTGKLSNGGPGSRSEYFIDGTQPTEHTVHEVGTT
LMDNGQTHELF
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
gtgaagttcgtaaagtattttttaatccttgcggtgtgttgcattttactgggagcagcc
tcgatatttggcctgtacaaatatattgagccgcagctacccgatgttgccacgctgaaa
gacatccggctgcaaacacctatgcaggtgtatagcgccgaaggcgaattgatcgctcaa
ttcggcgaaaaacgtcgtatcccattgacgttgaatcaaataccaccagaaatggtgcat
gcgtttatcgccacagaagacagccgtttttacgatcatcacggtgtcgaccctgtgggg
atcctgcgtgcagtctctatcgccatgttgtctggtcgcgcctcccaaggggcgagtacc
attacccagcaattggcgaggaacttctttttaagccctgaacggactttgatgcgaaaa
atcaaggaagcatttctggctatccgcatcgaacagatgctgaccaaagatgaaatcctt
gagctgtatctgaacaaaatttatctcggttaccgcgcctatggtgtcggtgctgcggcc
caagtctatttcggcaaagaagtccatgaattgaccctcagccaaatagcgatgatcgcc
gggttacctaaagcgccttctacgtttaacccgctctactcacatgacagagccgtggca
cggcgtaatgtggtgctgctacgtatgctggatgaaaaatacatcactcaggcgcaatac
gatcaagcccgcagtgaagagttggtggctaactaccatgtaccgcaaatcgccttttca
gcgccctatctggctgaaatggtgcgtcaggagatgattaaacgttacggtgaaaatgcg
tataccgacggttatcaggtctataccacgattaccagaaagctacagttggcggcagtt
gattcattacgcgccaacgtgctggcttatgatatgcgccatggctatcgcggcccgtcc
aatgtgttatggaaggtgggcgaaagtgcctggagccgtgaacagattatcgattcactg
aaagcattgccggtgtatggcccgctgttacctgcagtagtcaccgaggcggatgccgca
caagctacggcaatgctggctgatggcagcaacgtgaccttgccgatggtcggtatacgg
tgggcgcgtccgtttaaatcggataacgcccaaggtccggtccccaaaaaagcgactgat
gtcgttcagcctggtcagcaaatttgggtcagaaaggtcgatgataactggtggctggct
caagtgccggacgtcaattctgcgctggtgtctatcgatcccaataacggtgcaattaaa
gcgctagtaggcggttttgattttaaccaaagcaaatttaaccgggcaacgcaggcactg
cgtcaggttggctcgaatattaagccattcctgtataccgccgcgatggacaaaggcctg
acgctggccactatcctcaatgacctgccaatcacccgttgggattctggcgcaggcacc
gactggcggccaaaaaactcacctcccacttacgatggccctatccgtttgcgtcagggt
ttaggccaatcgaaaaacgtggtcatggtgcgggcaatgcgggccatgggggtggattac
gcggctgagtatttgcagcgctttggtttccctgcgcagaatatcgtgcattcagaatca
ctggctctgggttctgcctcctttacaccattacagctagtccgtggctatgccgtgcta
gcaaatggcggttacctggttgatccgtacttcatcactaaaatcactgatgatgtcggt
aatgttctgtttgaaacaaagccgaaggttgtctgtgataactgtaacttgccggtcatt
tacggtgatacccaacgttcagttgtactttctgacgacaatattgagaacgttgcaacc
tcgcagaaccagaatgccagtaacgtgccaatgccagagctggaacaggtgacaccggca
caaacgacgctaaatagcgaacagcaatatgcgccacacgtgataagcaccccgctggcg
ttcttgatgcgtgatgcattgaattctaatattttcggggaacctggctggatgggtacg
ggctggcgtgcgggtcgtgacctgaaacgtaaggatatcggcggtaaaacgggtacgaca
aacagctcgaaggatgcctggttctccggctacggcccagataccgtgacatccgtctgg
attggctttgatgaccatcgccgtaatttgggccgcagcacggcatcaggggcgatacca
gaccaaatttccggagcagaaggcggggcgaagacggcccagccagcatggaatgacttt
atgaaggtggcgcttgagggcttgccagagaagcaggttccaccaccaccgggtatcgtc
agtgtcgtgattgataagcaaacaggcaagttatctaatggcgggccgggcagccgctca
gagtactttatcgacgggacacaacccactgagcatacggtacatgaagttggtaccaca
ttgatggataacggccagactcacgaactgttctga
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