Yersinia pestis Nepal516 (biovar Antiqua): YPN_3955
Help
Entry
YPN_3955 CDS
T00370
Name
(GenBank) chromosomal replication initiator protein DnaA
KO
K02313
chromosomal replication initiator protein
Organism
ypn
Yersinia pestis Nepal516 (biovar Antiqua)
Pathway
ypn02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ypn00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
YPN_3955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ypn03032
]
YPN_3955
03036 Chromosome and associated proteins [BR:
ypn03036
]
YPN_3955
DNA replication proteins [BR:
ypn03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
YPN_3955
Chromosome and associated proteins [BR:
ypn03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
YPN_3955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DnaA
Bac_DnaA_C
DnaA_N
IstB_IS21
AAA
Hda_lid
AAA_14
Kinesin
AAA_22
AAA_16
ATPase_2
NACHT
AAA_19
NPHP3_N
BLOC1S3
Motif
Other DBs
NCBI-ProteinID:
ABG20282
UniProt:
Q1CCJ8
LinkDB
All DBs
Position
complement(4499203..4500591)
Genome browser
AA seq
462 aa
AA seq
DB search
MSLSLWQQCLARLQDELPATEFSMWIRPLQAELSDNTLALYAPNRFVLDWVRDKYLNNIN
GLLNDFCGTEVPLLRFEVGSKPAARAHNNPVTASVSAPVAPVTRSAPMRPSWDNSPAQPE
LSYRSNVNPKHTFDNFVEGKSNQLARAAARQVADNPGGAYNPLFLYGGTGLGKTHLLHAV
GNGIMARKANAKVVYMHSERFVQDMVKALQNNAIEEFKRYYRSVDALLIDDIQFFANKER
SQEEFFHTFNALLEGNQQIILTSDRYPKEINGVEDRLKSRFGWGLTVAIEPPELETRVAI
LMKKADENDIRLPGEVAFFIAKRLRSNVRELEGALNRVIANANFTGRAITIDFVREALRD
LLALQEKLVTIDNIQKTVAEYYKIKVADLLSKRRSRSVARPRQMAMALAKELTNHSLPEI
GDAFGGRDHTTVLHACRKIEQLREESHDIKEDFSNLIRTLSS
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
gtgtcactttcgctttggcagcagtgtcttgcccgattgcaggatgagttacctgccaca
gaatttagtatgtggatacgccccctacaggcggaactgagtgacaatactctggcgctt
tacgcacctaaccgttttgtactggactgggtccgtgataagtacttaaacaatatcaat
ggcttacttaatgatttttgtggcaccgaggtccctttactgcgttttgaggtagggagt
aaacctgcggcaagagcacacaataatccagttacagccagcgtgagtgcgcctgttgct
ccggttacccgcagtgcacctatgcgcccgagctgggacaactcacctgctcagcctgaa
ctttcttatcgttcgaatgtgaatccaaaacacacatttgataactttgttgaaggtaaa
tctaaccagttggcccgcgctgccgcccgtcaggtagccgataacccaggtggtgcctat
aacccgttatttctttatggcggaacaggcttgggtaaaacccatctgctacacgcggtg
gggaatggcattatggcccgtaaagccaatgctaaagtggtctatatgcattccgagcgt
tttgtgcaagatatggtcaaagccttgcaaaataatgctatcgaagagtttaaacgctat
tatcgttcggttgatgctttattaatcgatgatattcaattttttgccaataaagagcgt
tctcaagaagagtttttccacacctttaatgcgttgctagagggtaatcagcagatcatt
ttgacctcagatcgctatccaaaagagattaacggggtggaagatcgtctgaagtcgcgt
tttggttgggggctgacggtcgccattgagccaccagagctggaaacgcgtgtagcgatc
ctaatgaagaaagcggatgaaaatgatattcgcttaccaggagaggtcgcgttctttatt
gccaagcgtctgcgttccaatgtgcgtgaattggaaggggcattgaaccgtgtgatcgcc
aatgccaattttactggccgcgctatcacgattgattttgttcgcgaagccctgcgtgat
ttgttggcgttgcaagaaaagctggtcactatcgataatattcaaaagactgttgctgaa
tattataaaattaaggtcgctgacctgctctccaaacggcgttcccgttcggttgcccgc
cctcgccaaatggctatggcattggcaaaagagctaaccaaccacagcctgcctgaaatc
ggcgatgcgtttggtggccgcgaccataccacggtgttgcacgcttgccggaagattgag
caattgcgtgaggaaagtcacgacatcaaagaagatttctctaacttaatcagaacatta
tcctcctag
DBGET
integrated database retrieval system
