KEGG   Yersinia pestis Pestoides F (biovar Antiqua): YPDSF_0177
Entry
YPDSF_0177        CDS       T00505                                 
Name
(GenBank) methionine synthase (B12-dependent)
  KO
K00548  5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
Organism
ypp  Yersinia pestis Pestoides F (biovar Antiqua)
Pathway
ypp00270  Cysteine and methionine metabolism
ypp00450  Selenocompound metabolism
ypp00670  One carbon pool by folate
ypp01100  Metabolic pathways
ypp01110  Biosynthesis of secondary metabolites
ypp01230  Biosynthesis of amino acids
ypp04981  Folate transport and metabolism
Module
ypp_M00017  Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:ypp00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00270 Cysteine and methionine metabolism
    YPDSF_0177
  09106 Metabolism of other amino acids
   00450 Selenocompound metabolism
    YPDSF_0177
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    YPDSF_0177
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    YPDSF_0177
   04980 Cobalamin transport and metabolism
    YPDSF_0177
Enzymes [BR:ypp01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.13  methionine synthase
     YPDSF_0177
SSDB
Motif
Pfam: Met_synt_B12 S-methyl_trans Pterin_bind B12-binding_2 B12-binding
Other DBs
NCBI-ProteinID: ABP38599
LinkDB
Position
186448..190143
AA seq 1231 aa
MVDTVIDNKVKELHQQLAQRILVLDGGMGTMIQSYRLEEADYRGARFADWASDLKGNNDL
LVLSKPEVITAIHNAYLEAGADILETNTFNSTSIAMADYQMASLSAEINYEAARLARICA
DEWSARTPEKPRYVAGVLGPTNRTASISPKVNDPAFRNVSFDQLVEAYRESTRALIEGGV
DLIMIETVFDTLNAKAATFAVESEFEVMGVLLPVMISGTITDASGRTLSGQTTEAFYNSL
RHVKPLSFGLNCALGPDELRQYVAELSRISEYYVSAHPNAGLPNAFGEYDLEAKEMAEQI
GEWARAGFLNIVGGCCGTTPRHIAAMVNAVAGVPPRPLPDIPVACRLAGLEPLTIDANTL
FVNVGERTNVTGSARFKRLIKEEKYGEALDVARQQVESGAQIIDINMDEGMLDAEAAMVR
FLNLIAGEPDIARVPIMIDSSRWDVIEKGLKCIQGKGIVNSISMKEGVDAFIHHAKLVRR
YGAAMVVMAFDETGQADTRARKIEICRRAYKILTETVGFPPEDIIFDPNIFAVATGIEEH
NNYAVDFIEACADIKAELPHALISGGVSNVSFSFRGNDPVREAIHAVFLYYAIRNGMDMG
IVNASQLAIYDDLSDELRDAVEDVILNRRDDSTERLLDLAEKYRDSKSGEVAIQQAEWRG
WPVVKRLEYSLVKGITEFIELDTEEARQQADRPIEVIEGPLMSGMNVVGDLFGEGKMFLP
QVVKSARVMKQAVAYLEPYIEASKQKGTTAGKILLATVKGDVHDIGKNIVGVVLQCNNYE
IIDLGVMVPTEKILRTAREEKVDIIGLSGLITPSLDEMVNVAKEMERQGFTLPLLIGGAT
TSKAHTAVKIEQNYSGSTTYVSNASRSVGVVSALLSDTQREAFVAKTRKEYETVRIQHAR
KKPRTPPVSLQAARNNPTVIDWENYTPPVAHKLGVQVVEASIETLRNYIDWTPFFMTWSL
AGKYPRILEDEVVGEEAKRLLADANALLDKLSAEDLLHPKGVVGLFPANSVGDDIEIYRD
ERRDEVLAISYHLRQQTEKTDFPNYCLADYVAPKSSGKADYFGAFAVTGGLEEDALADAY
DAQHDDYNKIMIKALSDRLAEAFAEYLHERVRKVYWGFAPNENLSNEELVRENYQGIRPA
PGYPACPEHTEKGQIWQLLDVETHTGMKLTESYAMWPGASVSGWYFSHPDSKYFAVAQIQ
RDQVEDYAARKGMPTAEVERWLAPNLGYDAD
NT seq 3696 nt   +upstreamnt  +downstreamnt
gtggtggatacagtaatcgataataaggtcaaggaattgcaccagcagttggcgcaacgc
attttggtactggatggtggtatgggcaccatgatccagagctaccgattagaagaagca
gattaccgaggcgcgcgttttgctgactgggcaagtgacctaaaaggtaacaatgacctc
ttggtgctctccaagccagaagtcatcacggcgatccataatgcctaccttgaagccggt
gctgacattctcgaaaccaatacctttaactctacctccattgcgatggcggactatcag
atggcgtcactgtcggctgaaattaactatgaagccgcccgtctggcccgtatctgtgcc
gatgaatggagcgcccgcacgccagaaaaaccacgttatgttgccggggtgctggggcca
accaaccgtactgcctccatctcccctaaagttaatgacccggcgttccgtaacgtcagt
tttgatcagttggtcgaggcctatcgtgagtctacccgcgcgctgattgaagggggtgtt
gatttaattatgatcgaaacggtcttcgatacgttgaatgcgaaggccgcgacctttgcg
gttgaaagcgaattcgaagtgatgggcgtgctgttgccggtgatgatttccggcaccatt
accgatgcctccggccgtacgctgtctggtcaaacgacggaagctttttataactcgctg
cgccatgtcaaaccgctgtcgtttggtctgaactgtgcgctggggccggatgaactgcgc
caatatgttgctgagttatcgcgtatctctgaatattatgtcagtgcgcacccgaatgcc
ggtttgccgaatgcttttggtgaatatgatctggaagccaaagagatggctgagcagatt
ggcgagtgggcacgtgccggatttttgaatattgtcggcggttgctgcggtaccacaccc
cggcatattgcggcgatggtcaacgctgtcgctggggtgcctccgcgcccgttgcctgat
attccggttgcctgccgtttggccgggctggagccactgactatcgatgccaataccctg
tttgtgaacgtcggtgagcggaccaacgtcacgggttcggcacgctttaaacggctgata
aaagaagagaagtacggagaggcgctggatgttgcccgccaacaggtcgaaagcggcgcg
cagatcatcgatatcaacatggacgaaggcatgttggatgccgaagcggccatggtgcgt
ttccttaatctgattgccggggagcctgatattgccagggtgccgattatgatcgactcc
tcaaggtgggatgtgattgaaaaaggcctgaaatgtattcaaggcaaaggcatcgtgaac
tccatttcgatgaaagagggcgttgatgcctttattcatcacgccaaactggtacgccgt
tatggtgccgccatggtggtcatggcctttgatgaaaccgggcaagccgatacccgcgca
cgcaaaatcgagatttgccgccgtgcgtataaaatattgacggaaaccgtcggtttccca
ccagaagatattatcttcgatccgaatatttttgccgtagcgacggggattgaagagcat
aacaattatgccgtcgattttattgaagcctgtgccgatatcaaagccgagttgcctcac
gcgctgatttctggcggtgtctccaacgtttccttctctttccgagggaatgatccagta
cgtgaagccattcatgcagtgttcctctattacgctattcgcaatggcatggatatgggg
attgttaacgccagtcaattggcgatttatgacgacctgtctgatgaattacgtgatgcg
gtcgaggatgtgatcctcaaccgccgtgatgacagtactgagcgcctgctggatttagca
gaaaaataccgtgacagtaaaagtggcgaggtcgcgatccagcaagcagaatggcgtggt
tggccggtggtgaaacggttagagtattcgctggtaaaaggcattactgaatttattgag
ctggataccgaagaagcgcgccagcaggcagatcggccaattgaagtgattgaagggccg
ttaatgtctgggatgaatgtggttggtgacttgtttggtgaaggaaaaatgttcctgcca
caggttgtaaaatcagccagggtaatgaaacaggcggtggcctatctcgaaccttatatt
gaagccagtaagcagaagggtaccaccgccggtaaaatcttattagcaaccgtcaaaggc
gatgtgcatgacatcggcaagaacatcgtgggtgtggttttgcagtgtaataactatgaa
atcatcgatctgggcgtgatggtgccgacggaaaaaattctgcgcactgcacgggaagag
aaggtggatattatcggcctgtctggtctgattaccccgtcgctggacgagatggttaac
gtggcgaaagagatggagcgccaaggctttacgctgccgttgctcattggtggcgcaacg
acatccaaagctcacaccgcggtcaagattgaacaaaattatagcggttccaccacgtat
gtctctaacgcctcgcgcagtgtgggcgtggtatccgcgttgctatcggatacgcaacgg
gaggcatttgtggcaaaaacccgcaaagaatatgagactgtacgtatccaacacgcccgt
aaaaaaccgcgcaccccgccggtcagtttgcaggctgcacggaataacccaacggtgatt
gattgggagaactacactccgccagtggcccataaattgggggtacaggtggtggaggcc
agtattgaaactctgcgcaactatatcgactggacgccattctttatgacctggtcgttg
gcaggcaagtatccgcgcattttagaagatgaggtggtgggggaggaggccaagcgcctg
ctcgccgacgccaatgctttgttggataaattgtccgccgaggatctgctgcatccaaaa
ggcgtggttggtctgttcccggctaacagcgtcggcgatgatatcgaaatttaccgtgat
gagcggcgagatgaggtactggccatcagctatcatttacgccaacagaccgaaaaaacc
gacttcccgaactactgtttagctgactatgtcgcgcctaaatccagtggtaaagccgat
tattttggtgcgtttgcggtgaccggtggcttggaagaagacgcattggccgatgcttat
gatgcgcaacatgatgactacaataaaatcatgattaaggcattatcagaccgtctggcc
gaagcctttgccgagtatctgcatgagcgagtacgtaaagtgtattggggttttgcaccg
aacgaaaatctgagcaacgaagagttggtgcgcgaaaattatcaggggatccgcccggca
ccgggctatcccgcttgcccggagcacaccgagaaaggccaaatttggcagttgttggat
gtcgaaacccacaccggtatgaaactgaccgaatcctacgccatgtggcctggggcttcg
gtatcgggttggtatttcagccacccagacagcaaatattttgccgtagcacaaattcag
cgtgatcaggttgaggattatgccgcccgtaaagggatgcccactgccgaagttgaacgc
tggctagcccctaatctgggttacgatgcggattga

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