KEGG   Yersinia pestis Pestoides F (biovar Antiqua): YPDSF_0896
Entry
YPDSF_0896        CDS       T00505                                 
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
ypp  Yersinia pestis Pestoides F (biovar Antiqua)
Pathway
ypp03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ypp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    YPDSF_0896
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ypp03400]
    YPDSF_0896
Enzymes [BR:ypp01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     YPDSF_0896
DNA repair and recombination proteins [BR:ypp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     YPDSF_0896
 Prokaryotic type
     YPDSF_0896
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S RecR_HhH HHH_5
Other DBs
NCBI-ProteinID: ABP39296
LinkDB
Position
1019810..1020451
AA seq 213 aa
MNKEKRVTILTRLRDNNPHPTTELVYSTPFELLISVLLSAQATDVSVNKATARLYPVANT
PQAILDLGVDGLKEYIKTIGLYNTKAENVIKTCRILLEKHQGEVPEDRAALEALPGVGRK
TANVVLNTAFGWPTIAVDTHIFRVCNRTGFAPGSNVDQVEEKLLKVVPAEFKLDCHHWLI
LHGRYTCIARKPRCGSCIIEDLCEFKEKVYPEH
NT seq 642 nt   +upstreamnt  +downstreamnt
atgaataaagaaaaacgtgtcactattttgacccgtctgcgggataacaacccacatcca
acgactgaattagtttactcgacgccctttgaactgcttatttctgtgctgctatcggct
caagcaacagatgtcagtgtcaacaaagcgacagcccggctgtaccctgtggccaatacc
ccccaagccatcttggatctgggggttgatggcttaaaggaatatatcaaaaccattggc
ctgtataataccaaagctgaaaatgtcatcaaaacctgccgcattttactggaaaagcat
cagggagaggtgccagaggatcgggcggccttggaagcgttacccggtgtcggtcgtaag
accgccaatgtggtgttaaatacggcatttggctggcccacaattgccgttgatacgcat
atatttcgtgtgtgtaaccgcaccgggtttgctcctggtagcaatgttgatcaggttgag
gaaaaactactcaaagtggtcccggccgaatttaaactagattgtcaccactggctgatt
cttcatgggcgctatacctgtattgcccgaaaaccccgttgcggttcatgcattattgaa
gacttatgcgagtttaaagagaaagtctatccagagcattag

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