Yersinia pestis Pestoides F (biovar Antiqua): YPDSF_3092
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Entry
YPDSF_3092 CDS
T00505
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
ypp
Yersinia pestis Pestoides F (biovar Antiqua)
Pathway
ypp00300
Lysine biosynthesis
ypp00550
Peptidoglycan biosynthesis
ypp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ypp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
YPDSF_3092
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
YPDSF_3092
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ypp01011
]
YPDSF_3092
Enzymes [BR:
ypp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
YPDSF_3092
Peptidoglycan biosynthesis and degradation proteins [BR:
ypp01011
]
Precursor biosynthesis
Amino acid ligase
YPDSF_3092
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
ABP41450
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Position
complement(3505983..3507470)
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AA seq
495 aa
AA seq
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MADRNLRDLFAPWGLDVPERALREMTLDSRIAAAGDLFVAVVGHQTDGRRYIPQAIAQGV
AAIVAEADGVAPDVSVAEIHGVPVIYLRNLNQHLSTLAGQFYHQPGAALRLVGVTGTNGK
TTTTQLLAQWSQALGETSAVMGTVGNGLLGQVIPTENTTGSAVDIQHLLRNLVDQGATFA
AMEVSSHGLIQDRVAALSFAAVVFTNLSRDHLDYHGNMTSYEAAKWLLFSTHQSEHKIIN
ADDDVGRRWLSQLPQAVAVSMAGNVPKGWNGPWLSANKVIYHDNGASIAFDSSWGEGELE
SRLMGAFNVSNLLVALATLLVQGYPMAQLLAAAPHLQPVCGRMEVFNAPGKPTVVVDYAH
TPDALEKALAAARLHCTGKLWCVFGCGGDRDKGKRPLMGGIAEQLADCVVVTDDNPRSEE
PQAIVADILSGLLDAGRVQAIHGRAEAVTSAIMQAKEDDVVLIAGKGHEDYQLVGNRRLD
YSDRVTVARLLGGQA
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
gtggcagatcgtaatttgcgcgacttattcgctccttgggggctagacgtcccggagcgg
gcgctacgggaaatgacattagacagccgtattgcagctgccggcgatttatttgttgcg
gttgttggccaccagacggatgggcgtcgctacatcccgcaagctatcgcccagggtgtg
gctgcaattgtggccgaagccgatggtgtcgcaccggatgtcagcgttgccgagatacat
ggcgtccctgttatttatttgcgtaatttgaatcagcacttatccacgctggctgggcag
ttttaccatcagcctggcgccgcattgcgtttggtcggtgtaaccggaacgaatggcaaa
accaccactacgcaattgttagcacaatggagccaggcgctgggcgaaaccagtgcagtc
atgggcaccgtaggtaatggtttattagggcaggtgatacccacggagaacaccaccggt
tctgccgtagatattcaacatttgctgcgtaatctggttgatcaaggtgcgacttttgcc
gccatggaagtttcttcccacggtttgattcaagaccgtgttgctgcgttatcctttgca
gccgtagtgttcactaacttaagccgcgatcatctggattatcacggcaatatgacgagc
tatgaggcggccaaatggctgctgttctccactcatcagtccgaacacaaaattatcaat
gctgatgatgacgttggccgccgttggttaagccaattgccgcaggctgtcgccgtcagc
atggcaggcaatgtccccaaaggctggaatggcccgtggttatctgccaacaaggtgatt
tatcacgataatggtgccagcatcgcgtttgattcaagctggggcgaaggcgagctagaa
agccgtctgatgggcgctttcaacgtcagtaacttgttggtggcattagcgacgttactg
gttcaggggtatcccatggcgcagttgttagctgcagcgcctcatctgcaaccggtttgt
gggcgtatggaagtgtttaatgcgccgggtaaaccaaccgttgtggtggattatgcccac
acgccagatgcattagaaaaagccttggccgccgcccgtttacattgcaccggcaagctg
tggtgtgtgtttggctgtggcggtgaccgtgataaaggtaagcgcccacttatgggcggt
atcgcagaacaactggctgactgtgtcgtggtgaccgatgataacccacgcagtgaagag
ccacaggcgattgttgctgacattctcagtggcttgctggacgcggggcgtgtgcaggcg
atacatggccgtgccgaagccgtaaccagtgccattatgcaagccaaagaagacgacgtt
gtcctgattgccggtaaaggccatgaagattatcaattagttggcaatcgtcgcttggat
tattcagaccgtgtcaccgtcgcgcgtttgttaggggggcaggcatga
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