Yersinia pseudotuberculosis ATCC 6904: DJ40_144
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Entry
DJ40_144 CDS
T03307
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
ypq
Yersinia pseudotuberculosis ATCC 6904
Pathway
ypq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ypq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DJ40_144 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ypq03400
]
DJ40_144 (nth)
Enzymes [BR:
ypq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DJ40_144 (nth)
DNA repair and recombination proteins [BR:
ypq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DJ40_144 (nth)
Prokaryotic type
DJ40_144 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AIN15290
LinkDB
All DBs
Position
171597..172238
Genome browser
AA seq
213 aa
AA seq
DB search
MNKEKRVTILTRLRDNNPHPTTELVYSTPFELLISVLLSAQATDVSVNKATARLYPVANT
PQAILDLGVDGLKEYIKTIGLYNTKAENVIKTCRILLEKHQGEVPEDRAALEALPGVGRK
TANVVLNTAFGWPTIAVDTHIFRVCNRTGFAPGSNVDQVEEKLLKVVPAEFKLDCHHWLI
LHGRYTCIARKPRCGSCIIEDLCEFKEKVYPEH
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagagaaacgtgtcactattttgacccgtctgcgggataacaacccacatcca
acgactgaattagtttactcgacgccctttgaactgcttatttctgtgctgctatcggct
caagcaacagatgtcagtgtcaacaaagcgacagcccggctgtaccctgtggccaatacc
ccccaagccatcttggatctgggggttgatggcttaaaggaatatatcaaaaccattggc
ctgtataataccaaagctgaaaatgtcatcaaaacctgccgcattttactggaaaagcat
cagggagaggtgccagaggatcgggcggccttggaagcgttacccggtgtcggtcgtaag
accgccaatgtggtgttaaatacggcatttggctggcccacaattgccgttgatacgcat
atatttcgggtgtgtaaccgcaccgggtttgctcctggtagcaatgttgatcaggttgag
gaaaaactactcaaagtggtcccggccgaatttaaactagattgtcaccactggctgatt
cttcatgggcgctacacctgtattgcccgaaaaccccgttgcggttcatgcattattgaa
gacttatgcgagtttaaagagaaagtctatccagagcattag
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