Yersinia pseudotuberculosis ATCC 6904: DJ40_1676
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Entry
DJ40_1676 CDS
T03307
Symbol
lpxC
Name
(GenBank) UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
ypq
Yersinia pseudotuberculosis ATCC 6904
Pathway
ypq00540
Lipopolysaccharide biosynthesis
ypq01100
Metabolic pathways
Module
ypq_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
ypq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
DJ40_1676 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ypq01005
]
DJ40_1676 (lpxC)
Enzymes [BR:
ypq01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
DJ40_1676 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
ypq01005
]
Lipid A
DJ40_1676 (lpxC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
AIN14764
LinkDB
All DBs
Position
complement(1839240..1840160)
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AA seq
306 aa
AA seq
DB search
MIKQRTLKRIVQATGVGLHTGKKVTLTMRPAPANTGVIYRRTDLNPPVDFPADAKSVRDT
MLCTCLVNEHDVRISTVEHLNAALAGLGIDNIIIEVNAPEVPIMDGSASPFVYLLLDAGI
EELNSAKKFLRLKETVRVEDGDKWAELSPFNGFRLDFTIDFNHPAIDSSTQRYCLDFSAD
SFVRQISRARTFGFMRDIEYLQSRGLCLGGSFDCAIVVDDYRVLNEDGLRFEDEFVRHKM
LDAIGDLFMCGHNIIGAFTAYKSGHALNNKLLQAVLAKQEAWEFVTFQDEAEMPLAFKAP
STVLAY
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacaaaggactttaaaacgtattgttcaggcgacgggtgtcggtttgcacacc
ggtaaaaaagtcacgctgacaatgcgacccgcgccggctaataccggggtcatctatcgt
cgcactgacttgaatccaccggttgattttccggcagatgcaaaatccgtgcgtgatacc
atgctctgtacttgcctggtcaatgagcatgacgtgcgtatttctactgttgaacatctc
aacgctgctttggcagggttagggattgataacattattattgaagttaacgcccccgaa
gtaccaatcatggatggcagcgccagtccattcgtgtacttgttgctggatgccggtatt
gaagagttaaactcagcgaagaaattcctgcgtttgaaagagacagtacgggttgaagat
ggtgataaatgggctgaattgtctccattcaatggattccgtttggactttaccattgat
tttaatcacccggcgattgactcaagtacacagcgttattgcttagatttctcggccgat
tctttcgtccgccaaatcagccgtgcgcgtacttttggtttcatgcgtgatatcgaatat
ctgcagtcccgcggtttgtgcctgggcggtagtttcgattgtgccatcgtggtagatgat
taccgcgtattaaatgaagatggcctacgctttgaagatgagtttgttcgtcacaaaatg
ttggacgctattggcgacctgtttatgtgcggccataatattattggcgcatttacggcg
tacaaatctggtcatgccttaaataacaagctgttgcaggctgttttagcgaagcaagaa
gcttgggaatttgtgacgttccaagatgaagctgaaatgcctttggcattcaaagcaccg
tctacagtattagcttactaa
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