Yersinia pseudotuberculosis ATCC 6904: DJ40_3809
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Entry
DJ40_3809 CDS
T03307
Symbol
patB
Name
(GenBank) cystathionine beta-lyase PatB
KO
K14155
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
ypq
Yersinia pseudotuberculosis ATCC 6904
Pathway
ypq00270
Cysteine and methionine metabolism
ypq00450
Selenocompound metabolism
ypq01100
Metabolic pathways
ypq01110
Biosynthesis of secondary metabolites
ypq01230
Biosynthesis of amino acids
Module
ypq_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
ypq00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
DJ40_3809 (patB)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
DJ40_3809 (patB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ypq01007
]
DJ40_3809 (patB)
Enzymes [BR:
ypq01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
DJ40_3809 (patB)
Amino acid related enzymes [BR:
ypq01007
]
Aminotransferase (transaminase)
Class II
DJ40_3809 (patB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Cys_Met_Meta_PP
Aminotran_3
Motif
Other DBs
NCBI-ProteinID:
AIN14044
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All DBs
Position
4278384..4279565
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AA seq
393 aa
AA seq
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MDYNFDEVIDRSNTACEKWDAHYLNARFGMTDLTPMWVADMDFRSPDSVISALSERVNHG
IYGYTFRPDSFLDAITQWVKKRHQWLIKPEWISHSPGVVPGLAMAIRGLTKPGDKILIQS
PVYHHFANVIARNDREVVASELLYDNEKYDIDFAHFEACIATGVKLFILCNPHNPVGRVW
TRDELTTMGNICLRHNVIVIADEIHCDIVFKGSKFTPFASISPDFENNSITCMAPSKTFN
LLGTQTSAIIIPNQELRNKYETELNSLALGNPNPFGVIALETAYKEGEEWLESLLGYLQH
NLDFAVDFFKKYIPKITLVKPEGTYLLWLDCRGLGLTPYELEQFILTKAKLALNEGHIFG
ESGENFMRMNIGCPKSVLTSALIQLKYAVDDLN
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggactacaattttgatgaagtcatcgatagaagtaatacagcatgtgaaaagtgggat
gctcattatttaaatgctcgatttggtatgactgatttaacgcctatgtgggttgcggat
atggactttagatctccggactcagtgattagtgcactttccgaaagagttaaccacggt
atttatggctatactttcagacctgatagttttttagatgccattacacagtgggttaaa
aaaagacatcaatggttaattaagcctgagtggatctctcatagccccggcgttgttcct
ggattagccatggctattcgtgggttaacaaaaccgggagataaaatactcattcaatcc
cctgtttatcatcacttcgccaatgttattgcacgaaatgatcgtgaagttgtcgcgagt
gaattgctctatgataacgaaaaatatgatatagactttgcacattttgaagcgtgtatc
gccactggcgtgaaattgtttatcctttgcaatcctcataacccagtgggaagagtatgg
acacgggatgaactgacgaccatgggtaatatatgcttacggcataacgtgattgtcatc
gcagatgaaatacattgtgatattgtttttaaaggcagtaaattcactccttttgcctct
atctcacctgatttcgaaaataattcaattacctgcatggcacccagtaaaaccttcaat
cttttagggacacaaacttcagcgatcattatccctaatcaagaattacgtaataaatat
gaaaccgaattaaatagcctggcattagggaatcctaatccctttggcgtgatagcattg
gaaacagcatataaagaaggtgaggagtggttagagagtttgctgggttacttacaacat
aatctagactttgctgtggacttctttaaaaaatatataccgaagatcacattggttaag
cctgagggaacgtatctactctggttagattgccgtgggctagggttgactccgtatgaa
ctggagcaattcatactaacaaaagcaaaattagccttaaacgaaggccacatctttggc
gaaagtggtgaaaacttcatgaggatgaatattggttgtccaaaatcagtcctcaccagt
gcattaatacaactaaaatacgcggtagatgatttaaactag
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