Yersinia pestis Shasta: BZ15_1302
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Entry
BZ15_1302 CDS
T03718
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
ypv
Yersinia pestis Shasta
Pathway
ypv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ypv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BZ15_1302 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ypv03400
]
BZ15_1302 (nth)
Enzymes [BR:
ypv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BZ15_1302 (nth)
DNA repair and recombination proteins [BR:
ypv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BZ15_1302 (nth)
Prokaryotic type
BZ15_1302 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AJJ52930
UniProt:
A0AAX2I1V2
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All DBs
Position
1421898..1422539
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AA seq
213 aa
AA seq
DB search
MNKEKRVTILTRLRDNNPHPTTELVYSTPFELLISVLLSAQATDVSVNKATARLYPVANT
PQAILDLGVDGLKEYIKTIGLYNTKAENVIKTCRILLEKHQGEVPEDRAALEALPGVGRK
TANVVLNTAFGWPTIAVDTHIFRVCNRTGFAPGSNVDQVEEKLLKVVPAEFKLDCHHWLI
LHGRYTCIARKPRCGSCIIEDLCEFKEKVYPEH
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagaaaaacgtgtcactattttgacccgtctgcgggataacaacccacatcca
acgactgaattagtttactcgacgccctttgaactgcttatttctgtgctgctatcggct
caagcaacagatgtcagtgtcaacaaagcgacagcccggctgtaccctgtggccaatacc
ccccaagccatcttggatctgggggttgatggcttaaaggaatatatcaaaaccattggc
ctgtataataccaaagctgaaaatgtcatcaaaacctgccgcattttactggaaaagcat
cagggagaggtgccagaggatcgggcggccttggaagcgttacccggtgtcggtcgtaag
accgccaatgtggtgttaaatacggcatttggctggcccacaattgccgttgatacgcat
atatttcgtgtgtgtaaccgcaccgggtttgctcctggtagcaatgttgatcaggttgag
gaaaaactactcaaagtggtcccggccgaatttaaactagattgtcaccactggctgatt
cttcatgggcgctatacctgtattgcccgaaaaccccgttgcggttcatgcattattgaa
gacttatgcgagtttaaagagaaagtctatccagagcattag
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