Yersinia ruckeri Big Creek 74 (serotype O2): UGYR_08635
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Entry
UGYR_08635 CDS
T03887
Symbol
metH
Name
(GenBank) B12-dependent methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
yrb
Yersinia ruckeri Big Creek 74 (serotype O2)
Pathway
yrb00270
Cysteine and methionine metabolism
yrb00450
Selenocompound metabolism
yrb00670
One carbon pool by folate
yrb01100
Metabolic pathways
yrb01110
Biosynthesis of secondary metabolites
yrb01230
Biosynthesis of amino acids
yrb04981
Folate transport and metabolism
Module
yrb_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
yrb00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
UGYR_08635 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
UGYR_08635 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
UGYR_08635 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
UGYR_08635 (metH)
04980 Cobalamin transport and metabolism
UGYR_08635 (metH)
Enzymes [BR:
yrb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
UGYR_08635 (metH)
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Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
AKA38459
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Position
complement(1901646..1905356)
Genome browser
AA seq
1236 aa
AA seq
DB search
MAGHSGEEATVTNRVEKLHQQLAERILVLDGGMGTMIQSYRLEEADYRGARFADWPSDLK
GNNDLLVLSKPEVITAIHNAYLEAGADILETNTFNSTTIAMADYQMESLSAEINYEAARL
ARLCADEWTARTPDKPRYVAGVLGPTNRTASISPKVNDPAFRNVSFDQLVEAYRESTRAL
VEGGVDIIMIETVFDTLNAKAATFAVESEFEALGVMLPVMVSGTITDASGRTLSGQTTEA
FYHSLRHVKPLSFGLNCALGPDELRQYIAELSRISECYVSAHPNAGLPNAFGEYDLEAKE
MAEQIGEWARAGFLNIVGGCCGTTPRHIAAMVKAVAGVPPRPLPKIPVACRLAGLEPLTI
DASTLFVNVGERTNVTGSARFKRLIKEEKYDEALDVARQQVESGAQIIDINMDEGMLDAE
AAMVRFLNLIAGEPDIARVPIMIDSSKWDVIEKGLKCIQGKGIVNSISMKEGEAAFIHHA
RLVRRYGAAMVVMAFDEAGQADTRARKIEICRRAYKILTETVGFPPEDIIFDPNIFAVAT
GIEEHNNYAVDFIEACADIKAELPHAMISGGVSNVSFSFRGNDPVREAIHAVFLYYAIRN
GMDMGIVNAGQLAIYDDLSDELRDAVEDVVLNRRDDSTERLLDLAEKYRGSKSDEVAVLQ
AEWRGWPVAKRLEYSLVKGITEFIELDTEEARQEATRPIEVIEGPLMAGMNVVGDLFGEG
KMFLPQVVKSARVMKQAVAYLEPYIEASKQRGTTAGKILLATVKGDVHDIGKNIVGVVLQ
CNNYEIIDLGVMVPTEKILRTAREENVDIIGLSGLITPSLDEMVNVAKEMERQGFTLPLL
IGGATTSKAHTAVKIEQNYSGSTTYVSNASRSVGVVSALLSDTQRDEFIAKTRKEYETVR
IQHARKKPRTPPVSLQAARDNHTAIEWENYTPPVAHKLGIQAVEASIETLRNYIDWTPFF
MTWSLAGKYPRILEDEIVGEEARRLFADANQMLDKLSAEDLLHPKGVVGLFPANRVGDDI
EIYRDERRDEVLVVSHHLRQQTEKTDYPNYCLADYVAPKSSGKVDYLGAFAVTGGLEEDA
LADAYDVQHDDYNKIMIKALSDRLAEAFAEYLHERVRKVYWGFAPNENLSNEELVRENYQ
GIRPAPGYPACPEHTEKGQIWQLLDVETHTGMKLTESYAMWPGASVSGWYFSHPDSKYFA
VAQIQRDQVEDYAARKGMPLGEVERWLAPNLGYDAD
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
ttggcagggcattcaggcgaagaggcgacagtgacaaatagagtagaaaagctgcaccag
caactggcagaacgcattttagtcttggacggcggaatgggcaccatgatccagagttac
cgtctggaagaagcggattatcggggcgcacgttttgccgattggccgagtgatctgaaa
gggaacaatgatttattggtgttatccaagccggaagtcattactgccattcacaatgct
tatcttgaagccggcgctgatatcctcgaaaccaataccttcaactctaccaccattgcc
atggcggattatcagatggagtcgctgtcggcagaaattaactacgaggctgcccgttta
gccagactctgtgctgatgaatggacggctcgcacgccggataaaccgcgatatgtagcc
ggtgtcctcggcccaaccaaccgaactgcctctatctcaccgaaggttaacgatccggct
ttccgtaacgtgagttttgatcaattggttgaggcttatcgcgagtcaacccgcgcgttg
gtggagggcggcgttgatatcattatgatcgaaacagtattcgataccttaaatgccaaa
gcggccacttttgcggttgaatctgaatttgaagctttgggtgtgatgttgccagtcatg
gtttccggcaccattacggatgcttctggccgcacattatctggccaaacgacggaagct
ttttatcactccctacgccatgtgaagccgctttcttttggcctgaactgtgctttaggg
ccagatgaattacgtcaatatatcgctgagttatcgcgtatatctgaatgttatgtcagt
gcccacccgaatgctggtttgccgaatgcctttggtgaatatgatttggaggccaaagag
atggccgagcagattggcgagtgggcacgggcggggtttttaaatattgtcggtggttgt
tgtggcaccacaccgcgccatattgctgcgatggtcaaagccgttgctggcgtaccaccg
cgcccattgccgaaaattcccgtcgcctgtcgtctggctgggctggaaccgctgaccatt
gatgccagcactttgtttgtcaacgtgggtgagcgaaccaatgtcacaggttctgctcgt
ttcaagcgtttgattaaagaagaaaaatatgatgaagcgctagatgtagcgcgccagcag
gttgaaagcggcgcacaaattatcgacatcaatatggacgaaggtatgctggatgcggaa
gcggcgatggtccgttttctcaatctgattgctggcgaaccggatattgctcgtgtgccg
atcatgatcgactcatcaaagtgggatgtgatcgagaaaggactgaaatgtattcagggc
aaaggcattgtgaactcaatttcgatgaaagagggtgaagcggcctttatccaccacgcc
aggttggtgcgtcgttacggtgcggctatggtcgtgatggcatttgatgaggctggacag
gcggatacgcgggcgcgcaagatcgaaatttgtcgtcgggcatacaaaattctgaccgaa
accgtcggtttccctccagaagatattatttttgatcctaatattttcgccgttgccacc
gggatagaagagcacaataactacgcggttgatttcattgaagcctgcgcggatatcaaa
gccgagctgccacatgccatgatttctggcggcgtttccaatgtgtctttctcattccga
ggtaatgatccagtacgcgaagctattcatgccgtattcctgtattacgctatccgcaac
ggaatggatatggggattgtgaatgccggacagttagccatttatgatgatttatcggat
gaactgagagacgcagttgaagatgtcgttcttaaccgccgcgatgacagcaccgagcgt
ttgctggatttggcggagaaatatcgcggcagcaaaagtgatgaagtggcggtactgcaa
gcagagtggcgtggatggccggtggcaaaaaggctggaatattcgctggtgaaaggcatt
accgaatttatcgagctggatacggaagaagctagacaggaagcgactagaccgatagag
gtgattgaaggcccattaatggctggcatgaatgtggtcggagatctatttggtgaaggc
aaaatgtttctgccgcaggtagtgaagtctgcccgagtgatgaaacaagcggtggcttat
ctggaaccttatattgaggccagcaagcagagaggcaccactgccggtaaaatcctgctg
gctacggtcaaaggcgatgtgcatgacatcggcaaaaatattgtgggtgttgtattacag
tgtaataactacgaaattatcgatctgggtgtgatggtaccgacagagaaaattctgcgc
acggcgcgggaagaaaatgtcgatattatcgggttgtctggcctgattacgccctcgttg
gatgaaatggtgaacgtggcgaaagagatggaacgtcaaggttttacgcttcctttattg
atcgggggagccaccacctctaaagcccatactgcggttaaaattgagcaaaattacagc
ggttctacaacttatgtttctaacgcttctcgcagcgttggggtcgtgtcggcactgttg
tccgacacgcagcgagatgagtttattgccaaaacgcggaaagaatatgaaacagtgcgt
atccaacatgcgcgcaaaaaaccgcgtacacccccggttagcttacaagctgcacgggat
aaccacacggccattgagtgggaaaattacactccaccagtggcgcacaaactaggaata
caggcggtggaagccagtattgaaaccctgcgcaactacattgattggacgccattcttt
atgacctggtcgctggcgggcaagtatccacgcattctggaagatgagatcgtcggtgaa
gaggccaggcgtctgtttgccgatgctaatcagatgctggataagttgtcagcggaggat
ttactgcatcccaaaggtgtcgtcggcttgttccctgcaaatcgtgttggggatgatatc
gagatttatcgtgatgagcggcgcgatgaagtgctggtggtcagccaccatttacgccag
caaaccgaaaaaactgactacccaaattattgcctggcagattatgtcgcgccgaaatcc
agcggtaaagtcgactatcttggtgcttttgccgttaccggtggtctggaagaagatgcg
ctggctgatgcctatgatgttcaacatgatgattacaataaaatcatgattaaagcgtta
tccgatcgtttagctgaagcttttgcggaatatctgcatgagcgagtgcgtaaagtgtat
tggggctttgcaccgaatgagaatctgagtaatgaagagttagtgcgcgagaactatcaa
gggattcgtcccgcgccagggtatccggcttgcccagaacacacggagaaaggccagatt
tggcagttgttggatgtggaaacgcacacgggcatgaagctgactgaatcttacgccatg
tggccaggggcatcagtatcgggttggtatttcagtcatccggacagtaaatactttgcc
gttgcacagattcagcgagatcaggtggaggattatgctgcgcggaaagggatgccgctg
ggcgaggttgagcgctggctagcgccgaatttgggttacgacgctgattaa
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