Yersinia ruckeri Big Creek 74 (serotype O2): UGYR_13195
Help
Entry
UGYR_13195 CDS
T03887
Symbol
lpxC
Name
(GenBank) UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
yrb
Yersinia ruckeri Big Creek 74 (serotype O2)
Pathway
yrb00540
Lipopolysaccharide biosynthesis
yrb01100
Metabolic pathways
Module
yrb_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
yrb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
UGYR_13195 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
yrb01005
]
UGYR_13195 (lpxC)
Enzymes [BR:
yrb01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
UGYR_13195 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
yrb01005
]
Lipid A
UGYR_13195 (lpxC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
AKA39253
UniProt:
A0A380QNE5
LinkDB
All DBs
Position
2932087..2933007
Genome browser
AA seq
306 aa
AA seq
DB search
MIKQRTLKRIVQATGVGLHTGKKVTLTMRPAPANTGVIYRRTDLNPPVDFPADAKSVRDT
MLCTCLVNEHDVRISTVEHLNAALAGLGIDNIVIEVNAPEVPIMDGSASPFVYLLLDAGI
EELNSAKKFLRLKDTVRIEDGDKWAELSPFNGFRLDFTIDFNHPAIDSSTQRYRLDFSAD
SFVQQISRARTFGFMRDIEYLQSRGLCLGGSFDCAIVVDDYRVLNEDGLRFEDEFVRHKM
LDAIGDLFMCGHNIIGAFTAYKSGHALNNKLLQAVLAKQEAWEYVTFQDEAEMPLAFKAP
STVLAY
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacaaaggacattaaaacgtattgtacaggcgacgggtgtcggtttgcatacc
ggcaaaaaagtcacgctgacaatgcgacccgcgccggctaataccggggtcatctatcgt
cgcactgacttgaatccaccggttgatttcccggcagatgcaaaatccgtgcgtgatacc
atgctctgtacttgcctggtcaatgagcatgacgtgcgtatttcaaccgttgaacatctc
aacgctgctttagcagggttagggatcgataacattgttatagaagtaaacgcacctgaa
gtgccgattatggatggtagcgcgagtcctttcgtgtacttactgctagatgccggaatt
gaagagctgaattcagcgaagaaattcttgcgcctgaaagataccgtacggattgaagac
ggtgataaatgggctgagctgtctccatttaatggattccgtttagatttcaccattgat
tttaatcacccggcgatagattccagtacgcagcgttaccgcttggatttctcggctgac
tcatttgtacagcaaatcagtcgtgcgcgtacttttggctttatgcgtgatatcgaatat
ttgcagtcccgcggtttgtgcctgggcggtagtttcgattgtgccatcgtggtagatgat
taccgcgttctgaacgaagatggcctgcgcttcgaagatgagtttgttcgtcacaaaatg
ctggatgccatcggcgacctgtttatgtgcggccacaatattattggcgcgttcaccgcg
tacaaatcgggtcacgcactgaataataagttactgcaagccgtattggccaaacaggaa
gcttgggaatatgtgacgttccaggacgaagccgaaatgccattggcatttaaagcaccg
tccacggtattggcttactaa
DBGET
integrated database retrieval system
