Yokenella regensburgei: HEC60_06435
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Entry
HEC60_06435 CDS
T06519
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
yre
Yokenella regensburgei
Pathway
yre03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
yre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HEC60_06435 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yre03400
]
HEC60_06435 (nth)
Enzymes [BR:
yre01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HEC60_06435 (nth)
DNA repair and recombination proteins [BR:
yre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HEC60_06435 (nth)
Prokaryotic type
HEC60_06435 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
P_gingi_FimA
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QIU89014
LinkDB
All DBs
Position
1350075..1350710
Genome browser
AA seq
211 aa
AA seq
DB search
MNKTKRLEILTRLRDNNPHPTTELNFSSPFELLIAVLLSAQATDVSVNKATAKLYPVANT
PQAMLELGVDGVKSYIKTIGLFNSKAENVIKTCRILLEQHGGEVPEDRAALEALPGVGRK
TANVVLNTAFGWPTIAVDTHIFRVCNRTNFAPGKNVEQVEEKLLKVVPAEFKVDCHHWLI
LHGRYTCIARKPRCGSCLIEDLCEFKEKVDI
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaccaaacgccttgagatcctcacccgcctgcgggacaacaatccgcacccc
accacggagctgaacttcagttcaccgtttgagttgctcattgcggtgctgctctccgct
caggctaccgacgtcagcgtcaataaagccaccgcaaagctctacccggtggccaatacc
cctcaggcgatgctggagctcggtgtcgatggcgtgaaatcgtacatcaagaccattgga
ctctttaacagcaaagcggaaaacgtgattaaaacctgccgcatcctgcttgagcagcat
ggtggtgaagtgccggaagacagggccgcgctggaagctctgccgggcgtggggcgtaaa
acggctaacgtcgtgcttaacaccgcctttggctggcctacgattgccgttgatacgcat
attttccgcgtctgtaatcgtactaactttgcgccgggtaaaaatgtcgagcaggtagaa
gagaagctgcttaaagtggtccccgccgagtttaaggtcgactgccaccactggcttatt
ctgcacggtcgctacacctgtatcgcccgtaaaccacgctgtggctcctgcctgattgaa
gatctctgcgaattcaaagagaaggtcgatatttga
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