Yersinia rohdei: CH64_1936
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Entry
CH64_1936 CDS
T03610
Name
(GenBank) RND transporter, hydrophobe/amphiphile efflux-1 family protein
KO
K18138
multidrug efflux pump
Organism
yro
Yersinia rohdei
Pathway
yro01501
beta-Lactam resistance
yro01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
yro00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CH64_1936
01503 Cationic antimicrobial peptide (CAMP) resistance
CH64_1936
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
yro02000
]
CH64_1936
01504 Antimicrobial resistance genes [BR:
yro01504
]
CH64_1936
Transporters [BR:
yro02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
CH64_1936
Antimicrobial resistance genes [BR:
yro01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CH64_1936
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
AJJ09578
LinkDB
All DBs
Position
complement(2150114..2153239)
Genome browser
AA seq
1041 aa
AA seq
DB search
MLHFFIRRPKFAIVIALVITIVGWVSLHVIPVEQYPDITPPVVSVSAVYPGASARDVAQA
VASPLEAQVNGVSHMLYMESTSSNNGSYQLSITFASGTDPDMAAVEVQNRISQVSAQLPA
QVNENGISVRKRASNLLLGVSVFSPKQTHDALFVSNYTSIQLRDAIARINGVGDVQVFGA
RDYSMRVWLDPQRMEALNVSVQDIVTALQQQNVQAAAGQIGSSPSMPNQQQTLTISGQGR
LTDAQQFANVIIRSNPQGGMIRLGDVARVALGAQNYQVSAAQNQTESAFLVVYPVPGANA
LNVANGVRDEMARLSASFPPDLAYEINYDSTLPVTATLHEIAISLSLTLIVVLAVVYLFL
QSMRATFIVALTIPVSLLGTFAVLYVFGYTANTLSLFAIILALTIVVDDAIVVVENVERL
LANDPELTPAAATKQAMSQIAGPIIATTLVLMAVFVPIAILPGIVGELYRQFAVTLSAAV
ILSSINALTLSPALCAVLLKRRELSSTGLFGGINRGLDRARDGYVGLTGRISRRAVFSIA
ALLLVGLATWWGYTRLPSSFLPDEDQGYFFVSLQLPDGASLNRTQTVMDEMYQQVTANTA
VEDVIKITGFSLLSGNNSPNAGFAIVMLKPWGQRPHIDRVLSSIQANLATIPAAMIMAVN
PPAIAGLGSASGFDLRIQALMGQSPQELAQVSQGIIFAANQDPKLSRVFTTFSASVPEVN
LSIDRDRAALLQVPVSRIFQTLQTSLGGMNAGDFILDNRMFRVQLQNDMDFRQRAAQINN
LNVRSDNGALVSLANLVRLTPAVGAPFISNFNQFPSVAISGSAADGASSGQAMAAMEALL
AQNLPQGYSYSWSGMSWQEQQTGGQVIFIYLAALVFAYLFLVAQYESWSIPLVVILSVVF
AVGGAVAGLSAMGFANDVYAQIGLVLLIGLAAKNAILIVEFAKTRREEGASIAQAAQEGA
KQRFRAVMMTAISFILGVMPLVFASGAGAMSRQIIGITVFGGMLMATAVGILFIPALYLH
IQRLREWTKTRKHSEDEGPQQ
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgctacatttttttatccgtcgtcccaagtttgccattgttattgcactggtgataact
attgtcggttgggtgtcattgcatgttattccggtggagcaatatcctgatattacgccg
ccggtggtgtctgtcagtgcggtttatccgggggccagcgcccgtgatgtggcgcaggct
gtggcttccccgctggaagcacaggtcaatggcgttagccatatgctgtatatggagtcc
accagtagcaataatggcagctatcagctgagtattactttcgccagtggtacagacccc
gatatggccgccgttgaggtgcaaaaccgcatttctcaggtgagcgcccagctccctgcg
caagtcaatgagaatggtatttcagtgcgaaaacgggcgtctaatctgctgcttggggtc
agtgttttctcaccgaaacagacccatgacgccctgtttgtcagtaactacaccagcatt
cagttgcgtgatgctattgcgcgtatcaatggtgtcggtgatgtgcaggtgttcggtgct
cgtgattacagcatgcgagtttggctggatccgcaacgtatggaagcactgaatgttagt
gtgcaagacattgtcacggcattacagcaacaaaacgtacaggccgccgccgggcagatt
ggttcgtcaccatcgatgcccaaccaacagcaaaccctgaccatcagtgggcaagggcga
ctgaccgacgcccaacaatttgcgaatgtgattattcgcagcaatccacagggcgggatg
atccggctgggtgatgttgcccgcgtcgcgctgggggcgcagaattatcaagttagtgcg
gcacaaaaccagacagaatccgcttttttagtggtgtatccagtccctggtgctaatgcc
ctgaatgttgccaatggggtgcgcgatgaaatggcgcggctgtcggcctctttcccaccg
gatctggcctatgaaatcaactacgattccactttgccggtgaccgccactctgcatgaa
atcgccatttcactgagcttaaccctcattgtggtgctggcggtggtgtatctgttttta
caaagtatgcgggcgacatttattgtcgcgctcaccattccggtttcactgttgggcacc
tttgcggtgctttatgtctttggttacacggcaaataccctcagtttgttcgccattatt
ttggcgctaaccatcgtggttgatgatgccattgtggtggtcgaaaatgttgaacgcctc
ctcgccaatgatccagagttgactcccgcggccgccaccaaacaggccatgagtcagatt
gccgggcccatcattgcaaccactttggtgctgatggcggtgtttgtgccgatagctatt
ttgccgggcatcgtgggggaattgtatcggcaatttgccgtcaccctctcggcggcagtt
atcttatccagtattaatgcgttaaccctcagcccagcgctgtgcgcggtgttacttaag
cggcgggaattatcgagcacgggcttgtttggtggcatcaaccgtgggctagaccgcgcc
cgtgatggctatgttggcttgacggggcgcattagccgccgtgcagtgttcagcattgct
gctctgctgctggtggggctggcaacctggtggggttatacccgcctgccaagctctttc
ctaccggatgaagatcagggctatttctttgtcagtttacagctgccagatggcgcttcg
ttgaatcgcactcagacggtaatggatgaaatgtatcagcaggttaccgccaataccgcg
gtcgaggacgtgataaaaatcaccggtttcagcttgctcagtggcaataactcgcccaat
gccggttttgctattgtcatgctcaaaccttgggggcagcggccgcatattgatagggtg
ctgtccagcattcaggccaatttagccacgatacctgcggcgatgatcatggcggtaaac
ccaccggctatcgcggggttgggcagcgcgtctggttttgatttacggattcaggcactg
atggggcaatcgccgcaggagctggcgcaggtcagtcaggggattatttttgctgccaat
caagacccaaaactcagccgggtatttaccactttcagtgcctcagtacctgaagttaat
ctcagtattgatagggatcgcgccgccttgctacaggtgccggtcagccgtattttccaa
accctgcaaacctcactcggcgggatgaatgccggtgatttcatcctggataaccgcatg
tttagggtgcaattacaaaatgatatggatttccgccagcgcgctgcgcagataaataac
ttgaatgtgcgcagtgataacggggccttggtcagcctggcaaatctggtcagattaact
cctgctgtgggcgcaccttttattagtaatttcaaccaattcccttcggtagccattagt
ggttctgccgccgatggggccagttctgggcaggcaatggcggcgatggaagcgcttttg
gcacagaatttaccgcaaggttacagctatagctggagtgggatgtcatggcaggagcag
caaactggcgggcaggtcatctttatttatctggcggcgttggtgttcgcctatctgttc
ttggtggcccaatacgaaagctggagtatcccgctggtggtgattctgtcggtggtgttt
gccgtcggcggggcggtggcgggattgtcagcgatgggctttgccaatgacgtctatgcg
caaatcgggctggtgctgctgatcgggttggcggccaaaaatgcgatattaattgtcgaa
ttcgccaaaacccggcgagaagagggcgcaagtattgcacaagcggcacaagagggtgcc
aaacagcgttttcgcgccgtgatgatgacggcgatttcgtttattctcggcgtgatgccg
ctggtgtttgccagtggcgctggcgcaatgagtcgccagattattggtatcacggtgttt
ggcgggatgctaatggctaccgctgtggggattttgtttattccagccctgtatttgcat
attcagcggctgcgagaatggactaaaacccgcaaacattctgaggacgaagggccgcag
cagtaa
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