Yersinia ruckeri YRB: BD65_3202
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Entry
BD65_3202 CDS
T03611
Symbol
rumB
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumB
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
yru
Yersinia ruckeri YRB
Brite
KEGG Orthology (KO) [BR:
yru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
yru03009
]
BD65_3202 (rumB)
Enzymes [BR:
yru01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
BD65_3202 (rumB)
Ribosome biogenesis [BR:
yru03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BD65_3202 (rumB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Methyltransf_15
Cons_hypoth95
Methyltransf_12
TehB
Methyltransf_11
Methyltransf_32
MM_CoA_mutase
Motif
Other DBs
NCBI-ProteinID:
AJI94579
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Position
3521800..3522939
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AA seq
379 aa
AA seq
DB search
MHCAQYTAGSCRSCQWLEKSYSQQLADKQHHLESLLAGQPVAEWLTPVFGRESAFRNKAK
MVVSGSVERPLLGLLQRDGTAVDLSDCPLYPASFAPVFAILKLFIARAGLTPYNVARKRG
ELKFLLLTESTVSGDMMLRFVLRSESKLAQIRHALSWLQQQLPQLRVISVNIQPVHMAIL
EGDQEILLTEQHALEEQFNQVPLYIRPQSFFQTNPQVATALYATARDWVRGLNIGSMWDL
FCGVGGFGLHCATTETRLTGIEINAEAIACARQSAEKLGLKQVSFAALDSTRFATGEAEV
PELVLVNPPRRGISAELCCYLSQMAPPFILYSSCHAETMAQDIAALPDYRIQRVQLFDMF
PHTSHYEVLTLLVRRELTA
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgcattgcgcacagtatacggcgggtagctgccgttcctgtcagtggttggagaaaagt
tactcccaacaactggcggataaacaacatcatctggaaagtttgctcgccgggcagccg
gttgctgaatggctaacgccagttttcggtcgtgaaagcgcgtttcgtaataaagcgaaa
atggtggtcagcggcagcgtagaacggccattattaggcctattacagcgtgatggcacg
gcggtagatctcagtgattgcccgttgtatcccgccagttttgcgccagtatttgccatc
cttaaactgtttatcgcccgtgcaggcctgacaccctacaacgtagcgcgcaaacgtggg
gaattaaagtttctactgctgacagagagcacggtcagtggtgatatgatgctgcgtttt
gtgctgcggtcagaaagtaaactggctcagattcgccatgcattatcctggttacagcag
caattaccgcaactgcgggttatctctgtcaatattcagccagtgcatatggcgattctg
gaaggggatcaggaaatcctattgacagaacaacatgcgctagaagaacagtttaatcag
gttccgttgtatatccgaccacaaagtttcttccagaccaatccacaggttgctacggcg
ttatacgccactgcacgagattgggtacgtgggttgaacattggcagtatgtgggatctg
ttttgcggtgtcggcgggtttggcttacattgcgcgacaacagaaacccgtctgaccggc
attgaaatcaacgccgaggctattgcttgcgcccgccaatcggcagaaaaattggggttg
aagcaggtcagttttgccgcattggattcaacccgcttcgcgacgggtgaggctgaagtg
ccggagttggtattggttaatccgccacgacgcggcattagcgctgaactttgttgctat
ctcagccagatggcaccgccgttcattctttattccagttgtcatgcggaaacgatggct
caagacattgccgcgctgccggattaccgtattcaacgcgttcagctatttgatatgttt
ccacataccagccactacgaagtactgacgctgttagtgcgacgcgaactgacagcgtaa
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