Yersinia similis: BF17_05955
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Entry
BF17_05955 CDS
T03057
Symbol
metH
Name
(GenBank) B12-dependent methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
ysi
Yersinia similis
Pathway
ysi00270
Cysteine and methionine metabolism
ysi00450
Selenocompound metabolism
ysi00670
One carbon pool by folate
ysi01100
Metabolic pathways
ysi01110
Biosynthesis of secondary metabolites
ysi01230
Biosynthesis of amino acids
Module
ysi_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
ysi00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
BF17_05955 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
BF17_05955 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
BF17_05955 (metH)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
BF17_05955 (metH)
Enzymes [BR:
ysi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
BF17_05955 (metH)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
AHK18919
UniProt:
A0A0T9R749
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Position
complement(1225641..1229336)
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AA seq
1231 aa
AA seq
DB search
MVDTVINNKVKELHQQLAQRILVLDGGMGTMIQSYRLEEADYRGARFADWASDLKGNNDL
LVLSKPEVITAIHNAYLEAGADILETNTFNSTSIAMADYQMASLSAEINYEAARLARICA
DEWSARTPEKPRYVAGVLGPTNRTASISPKVNDPAFRNVSFDQLVEAYRESTRALIEGGV
DLIMIETVFDTLNAKAATFAVESEFEAMGVLLPVMISGTITDASGRTLSGQTTEAFYNSL
RHVKPLSFGLNCALGPDELRQYIAELSRISEYYVSAHPNAGLPNAFGEYDLEAKEMAEQI
GEWARAGFLNIVGGCCGTTPRHIAAMVKAVAGVPPRPLPDIPVACRLAGLEPLTIDVNTL
FVNVGERTNVTGSARFKRLIKEEKYGEALDVARQQVESGAQIIDINMDEGMLDAEAAMVR
FLNLIAGEPDIARVPIMIDSSRWDVIEKGLKCIQGKGIVNSISMKEGVDAFIHHAKLVRR
YGAAMVVMAFDETGQADTRARKIEICRRAYKILTETVGFPPEDIIFDPNIFAVATGIEEH
NNYAVDFIEACADIKAELPHALISGGVSNVSFSFRGNDPVREAIHAVFLYYAIRNGMDMG
IVNAGQLAIYDDLSDELRDAVEDVILNRRDDSTERLLDLAEKYRDSKSGEVAIQQAEWRG
WPVVKRLEYSLVKGITEFIELDTEEARQQADRPIEVIEGPLMSGMNVVGDLFGEGKMFLP
QVVKSARVMKQAVAYLEPYIEASKQKGTTAGKILLATVKGDVHDIGKNIVGVVLQCNNYE
IIDLGVMVPTEKILRTAREEKVDIIGLSGLITPSLDEMVNVAKEMERQGFTLPLLIGGAT
TSKAHTAVKIEQNYSGSTTYVSNASRSVGVVSALLSDTQRDDFIAKNRKEYETVRIQHAR
KKPRTPPVSLQAARDNPTVIDWENYTPPVAHKLGVQAVEASIETLRNYIDWTPFFMTWSL
AGKYPRILEDEVVGEEAKRLLADANELLDKLSVEGLLHPKGVVGLFPANSVGDDIEIYRD
ERRDEVLAISHHLRQQTEKTDFPNYCLADYVAPKSSGKADYFGAFAVTGGLEEDALANAY
DAQHDDYNKIMIKALSDRLAEAFAEYLHERVRKVYWGFAPNENLSNEELVRENYQGIRPA
PGYPACPEHTEKGQIWQLLDVETHTGMKLTESYAMWPGASVSGWYFSHPDSKYFAVAQIQ
RDQVEDYAARKGMPIAEVERWLAPNLGYDAD
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
gtggtggatacagtaatcaataataaggtcaaggaattgcaccagcagttggcgcaacgc
attttggtactggatggtggtatgggtaccatgatccagagctaccgattagaagaagca
gattaccgaggcgcacgctttgctgactgggcaagtgacctaaaaggtaacaatgaccta
ttggtgctatccaagccagaagtcatcacggcgatccataatgcctaccttgaagctggt
gctgacattctcgaaaccaatacatttaactctacctccattgcgatggcggactatcag
atggcgtcactgtcggctgaaattaactatgaagccgcccgtctggcccgtatctgtgcc
gatgaatggagtgcccgtacaccagaaaaaccacgttatgttgccggggttctggggcca
accaaccgtactgcctccatttcacctaaagttaatgacccagcgtttcgtaacgtcagt
tttgatcagttggtcgaggcttatcgggagtctacccgcgcgctgatcgaaggtggtgtt
gatttaattatgatcgaaacggtcttcgatacgttgaatgcgaaggccgcaacctttgcg
gttgaaagcgaattcgaggcgatgggcgtgctgttgccggtgatgatttccggcaccatt
accgatgcctctggccgtacgctgtctggccaaactacggaagctttttataactcgctg
cgccatgtcaaaccgctgtcatttggcctgaactgcgcgctggggccggatgaactgcgc
caatatatcgctgagttatcgcgtatctctgaatattatgtcagtgcgcacccgaatgcc
ggtttgccgaatgcttttggtgaatatgatctggaagccaaagagatggctgagcagatt
ggcgagtgggcacgtgccggatttttgaatattgtcggtggttgctgcggcaccactcct
cggcatattgcagcgatggttaaagccgtcgccggggtgcctccacgcccgttgcctgat
attccggttgcctgccgtttagcggggctggagccactgactatcgatgttaacaccctg
tttgtgaacgtcggtgagcggaccaacgtcacggggtcggcgcgttttaagcggctgata
aaagaagagaagtacggcgaagcactggatgttgcccgccaacaggttgaaagcggtgca
cagatcatcgatatcaacatggacgaaggcatgttggatgccgaagcggccatggttcgt
ttcctcaatctgatcgccggggagcctgatattgccagggtgccgattatgatcgactcc
tcaaggtgggatgtgattgaaaaaggcctgaaatgcattcaaggcaaaggcatcgtgaac
tccatttcgatgaaagagggcgttgatgcctttattcatcacgccaaactggtacgtcgt
tatggtgcggccatggtggtcatggcctttgatgaaaccgggcaagccgatacccgcgca
cgtaaaattgagatttgccgccgcgcgtataaaatattgacggaaaccgtcggtttccca
ccggaagatattatcttcgatccgaatatttttgccgtagcgacggggattgaagagcat
aacaattatgccgtcgattttattgaagcctgtgccgatatcaaagccgagttgcctcac
gcgctgatttcaggcggtgtctccaacgtctccttctccttccgagggaatgatccggta
cgtgaagccatccatgcggtattcctctattacgctattcgcaatggcatggatatgggg
attgttaacgccggccaattggcgatttatgacgatctgtctgatgaattacgtgatgca
gtcgaggatgtgatcctcaaccgccgtgatgacagcaccgagcgcctgctggatttagca
gaaaaataccgtgacagtaaaagtggtgaggtcgcgatccagcaagcagaatggcgtggt
tggcccgtagtgaaacggctggaatattcactggtaaaaggcattactgaatttattgaa
ctggatactgaagaagcgcgccagcaggcagatcggccaattgaagtgattgaagggccg
ttaatgtccgggatgaacgtggttggtgacttgtttggtgaaggaaaaatgttcctgcca
caggttgtaaaatcagccagggtaatgaaacaggcggtggcctacctcgaaccttatatt
gaagccagtaagcagaagggtactactgcaggtaaaatcttgttggcgaccgtcaaaggt
gatgtgcatgacatcggcaagaacattgtgggtgtggtcttacagtgtaataactatgaa
atcattgatctgggcgtaatggtgccgacggaaaaaattctgcgcactgcacgggaagag
aaggtggatattatcggcctgtctggcctgattaccccgtcgctggacgagatggttaac
gtggccaaagagatggagcgccagggctttaccctgccgttgctcatcggcggggcaacg
acatccaaagctcacactgcggtcaagattgaacaaaattacagcggttccaccacgtat
gtctctaacgcctcgcgcagtgtgggcgtggtatccgccttgctgtcagatactcaacgc
gatgattttatagccaagaatcgtaaagaatatgaaaccgtgcgtatccaacatgctcgt
aaaaaaccgcgcaccccacccgtcagtttgcaggctgcacgggataacccgacggtaatt
gattgggagaactacaccccgccagtagctcataaattaggagtacaggcggtggaagcc
agcattgaaaccttgcgcaactacatcgattggacgccattctttatgacctggtcgttg
gcaggcaagtatccacgcattttggaagatgaggtggtgggcgaggaagccaagcgcctg
ttagccgatgccaatgaactgttggataaactgtcagttgaggggctgttgcatccgaaa
ggcgtggttggcctgttcccggctaacagcgtcggcgatgatatcgaaatttaccgtgat
gagcggcgggatgaggtgctggcaatcagccaccatttacgtcaacagaccgaaaaaacc
gatttcccgaactactgtttggctgattatgtcgcgcctaaatccagtggtaaagccgat
tattttggcgcttttgcggtgaccggtggcttggaagaagacgcgttggctaatgcttat
gatgcgcaacatgatgattacaataaaattatgattaaggcgttatcagaccgtctggcc
gaagcctttgccgagtatctgcatgagcgagtacgtaaagtgtattggggctttgcaccg
aacgaaaatctgagtaacgaagagttggtgcgtgagaattatcaggggatccgcccggca
ccgggctatcccgcttgtccggaacacaccgagaaaggccaaatctggcagttgttggat
gttgaaactcacactggcatgaaactgaccgaatcctacgccatgtggccgggggcttcg
gtatccggttggtattttagccacccagacagcaaatattttgccgtagcacaaattcag
cgtgatcaggttgaggattatgccgctcgtaaagggatgcctatcgctgaagttgaacgc
tggctagcccctaatctgggttacgacgcagattga
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