Yersinia similis: BF17_15850
Help
Entry
BF17_15850 CDS
T03057
Symbol
rumB
Name
(GenBank) 23S rRNA methyltransferase
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
ysi
Yersinia similis
Brite
KEGG Orthology (KO) [BR:
ysi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ysi03009
]
BF17_15850 (rumB)
Enzymes [BR:
ysi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
BF17_15850 (rumB)
Ribosome biogenesis [BR:
ysi03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BF17_15850 (rumB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Methyltransf_15
Methyltransf_12
Cons_hypoth95
Methyltransf_4
Methyltransf_11
Methyltransf_32
Motif
Other DBs
NCBI-ProteinID:
AHK20608
LinkDB
All DBs
Position
3331133..3332263
Genome browser
AA seq
376 aa
AA seq
DB search
MHCAQYTAGRCRSCQWLDKPYPQQLADKQHHLESLLAGHAVTQWLAPVFGRESAFRNKAK
MVVSGSVERPLLGMLHRDGTPVDLCACPLYPATFEPVFAVLKTFIARAGLTPYNVARKRG
ELKFLLLTESTYNGELMLRFVLRSETKLAQLTAALPWLQQQLPQLAVISANIQPVHMAIL
EGEREIPLTEQQALPERFNQVPLYIRPQSFFQTNPQVAASLYATARQWVQEHEVHSMWDL
FCGVGGFGLHCAGPETQLTGIEISAEAIACARQSAEQLGLKNVSFAALDSTRFATAEAQI
PELVLVNPPRRGIGHELCDYLSQMAPEFILYSSCNAETMAKDISLLAGYHIKRVQLFDMF
PHTSHYEVLTLLALRR
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgcattgcgcacagtatacggcgggtcgctgccgttcttgtcagtggctggataaaccc
tatccacaacaactcgctgataaacaacatcatctggaaagcctgttggctggtcatgcg
gtcacccagtggctagcaccggtttttgggcgcgaaagtgcctttcgcaacaaggcgaaa
atggtcgtcagcggcagtgtggaacgcccgttactcggtatgctgcatcgtgacggtaca
ccggttgatttatgcgcatgtccactttatccggccaccttcgaaccggtatttgcggta
ctgaaaacctttattgccagggcgggtttgactccttataacgttgcgcgcaagcgtggc
gaacttaaattcctgttactcacagaaagtacctacaacggtgaattgatgctgcgcttt
gtgctgcgttctgaaaccaagttagcgcagttaactgccgcgttaccgtggctgcaacaa
cagttgccgcagttggcggtgatttcagccaatattcagccagtgcatatggcgattctg
gaaggggagcgggagatcccgctgaccgaacaacaggccctgcctgagcggtttaatcag
gtgccgttgtatatccgcccacaaagttttttccagaccaatccacaggtggcggcttcg
ttgtatgcaacagcacggcagtgggtgcaggagcatgaggttcacagtatgtgggatctg
ttctgtggtgtgggcggctttggtttacattgtgcggggccagagactcaattaacaggc
attgaaatcagtgctgaagctatcgcctgtgcccgccagtcggctgagcagttagggcta
aaaaatgtcagtttcgctgcactggattctacccgctttgctaccgctgaagcccaaata
cctgaactggtcttggtgaatccaccacggcgggggattggccacgagttatgtgattac
ctgagccagatggcacctgaatttattctctattcaagttgtaatgcagagacgatggcg
aaagatatcagtttgcttgcgggttaccacattaaacgggtacaactgtttgatatgttc
ccgcataccagccactacgaagtactcacattactggctctgcgtcgctag
DBGET
integrated database retrieval system
