Zonotrichia albicollis (white-throated sparrow): 102063385
Help
Entry
102063385 CDS
T07911
Symbol
BRCA1
Name
(RefSeq) breast cancer type 1 susceptibility protein isoform X1
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Pathway
zab03440
Homologous recombination
zab03460
Fanconi anemia pathway
zab04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102063385 (BRCA1)
09124 Replication and repair
03440 Homologous recombination
102063385 (BRCA1)
03460 Fanconi anemia pathway
102063385 (BRCA1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
zab01009
]
102063385 (BRCA1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zab04121
]
102063385 (BRCA1)
03036 Chromosome and associated proteins [BR:
zab03036
]
102063385 (BRCA1)
03400 DNA repair and recombination proteins [BR:
zab03400
]
102063385 (BRCA1)
Enzymes [BR:
zab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102063385 (BRCA1)
Protein phosphatases and associated proteins [BR:
zab01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102063385 (BRCA1)
Ubiquitin system [BR:
zab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102063385 (BRCA1)
Multi subunit type E3
BRCC complex
102063385 (BRCA1)
Chromosome and associated proteins [BR:
zab03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
102063385 (BRCA1)
DNA repair and recombination proteins [BR:
zab03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
102063385 (BRCA1)
BRCA1-A complex
102063385 (BRCA1)
BRCA1-B complex
102063385 (BRCA1)
BRCA1-C complex
102063385 (BRCA1)
BRCA complex
102063385 (BRCA1)
FA (Fanconi anemia) pathway
Downstream FA components
102063385 (BRCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT_assoc
BRCT
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
BRCT_2
zf-RING_UBOX
RING_XB3-XBAT31
zf-RING_2
zf-RING_6
zf-C3HC4_3
zf-Nse
zf-RING_5
BRCT_3
zf-RING_10
Zf_2nd_IFT121
RTT107_BRCT_5
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
102063385
NCBI-ProteinID:
XP_014127770
Ensembl:
ENSZALG00000004870
UniProt:
A0A8D2M9C4
LinkDB
All DBs
Position
Unknown
AA seq
1772 aa
AA seq
DB search
MDFPVITIGQVQNVLSAMQKNLECPICLDVVQEPVSTKCDHIFCRFCMFKLISKKKKGVV
ECPLCKTEVTKRSLKANSRFKQLIEGLLETIHAFELDTGVKFLKSHHFPKTSTEATAAES
LCKESSVIQSKGFRNRRKSAKGNGQENFPLQEASVNIQLTDAKMCHPRSKTQKSGSQKGN
IEFGSESSEEFFKQASKTGFEGKGAVQISSQARLEELGSAEKGNENSCNAQPDKLGAKEI
TLPGITGEGDFSKECLSKKSTQSITECAKPDQVNVAGCQNSPLGVLAVELPPEQGDRAGG
ASPTLNGDTEGMEEQQSQHSSDHQESDLEDGSENRLDKSRGMDTDAQSVEAAEGYEPENE
SSQDRELPQAEPLHSAPLNKVSKKRLKQSIQKVNEWFSKSNEILSSGSSVDESAASADGS
GEGDLCLSDKESCISGRTDPMADSMGAAAVEGKKRWSKQTAEDIKDKIFGRTYKRGRKSN
PPSTLRDILPARQKEGVAAAQGLKGFSKDRLKRKRKSACLQPEDFIKKKETEKGDGGPQS
VNGGLGEAEEKSCDESVAVNGSHLSQNRANNTSTEPEEGGESTWKKAAEKVPAQHCDGEP
EMYNCDQKSTRKRSSAAKRCRHSSRTMCALQLVVDRDSDFPDPAEPQIDSYPSSAEPEQN
PLRRSRRLQLLSEEMAKETRKRVKKSKKRNGSDPGRCVSGEQRNVAAPSAECRELSEPQG
ELSSRPVTRLEGGDLQADEVQVNLKNLSDTAGTGQSLFSPSGLPSNCGSTVPDTGSQDSR
IFGSPLLLQVPSVSAGQTASPQAEVTESPPASPPQPGHDSQNAPGHFKAEKLPMAKNVLE
LSKEAEDSDLDTQYLRNIFRHSKRSSFSLFQTRALADPPSENFNLSHAAQGENKASKQLQ
PESLQEERTDQNLSRVSEKDEEKEKLKSCESARVDPVPCFAVSRDDVSQAAEEGTLTPAG
AGTAQAEHKNGLLQEEQGIEKPVSDETGTESGLGQNPIESDGSQSDQSNTEGHEPSQNDL
HTGQANSFSSESNQAAKTEVVDCTEPILHFQSTSTISPAACQQSPAELSCEVTRTKSSRR
GRKCVNGNEEEAAQTVSTAAEALEEPLGENCGLTGLSETPDALLCSEPDIEESPSLCDTD
RKEQSAVFVRSDSAELQSRNADSKPTPRGPGKPRRRVQKLPSSDEESCEDEELPCFRTLI
FSKSASTPLQADQQMAPEVEPAVAESPGSPSVGNDGNALQKVPEASLGRVCASPSQESEC
SVNLFSSQSNMSEESLNGAQELNKHLPQAQVSKEMSSVNESKETSPNSGGGLKETKDESQ
EDPDMGANLGEGCGSDSEMSIVEDSCGAFSQGEILTTQQKNAMQKSLKKLQQEMAALEAV
LKQNGSQSWEVLPVQRELPHPSPEGASEMEQARPEKTRSPELLLSASKSSLRKSSGLGKG
PECDSAVQNKTPSEKTKPVQEHRQCQLEAENAEEQNSGTGQNSASVPSDLFGNVTQSSDN
SSSSAMLFIPQTAEATAGPVVAQSTGKSSGPGHKFKKSEFFPVPVLHNSTGKENATNPVR
TKRKEMSIVVSGLNHSEHLVVQKFVKKTQSTLSNHITAGTTHVIMKTDEELVCERTLKYF
LGIAGGKWVVGYQWIIQSFKAGKVLDEENFEVRGDVINGRNHQGPKRARQALTAKIFKDF
EICCCGPFTDMTTEQLEWMVELCGASVVKQPGQFTGTASSTAVVVVQPDAWEENTDYGAI
QQQSSVALVTREWVLDSVACYQCQELRAYLVS
NT seq
5319 nt
NT seq
+upstream
nt +downstream
nt
atggacttcccagtgattactattggacaagtacaaaatgtgctttcagcgatgcagaag
aacttggagtgcccaatatgcctggatgtggtgcaagagcctgtttcaacaaaatgtgat
cacatattctgcagattctgcatgttcaaactgatcagcaaaaagaagaaaggtgtggtg
gagtgtcctctgtgtaagactgaagttaccaagagaagtctgaaagcaaattccagattt
aagcaactcattgaaggactgttggaaactatccatgcttttgagcttgacactggagtg
aagtttttaaagagtcatcactttcctaaaacatccacggaagccactgctgctgagtcc
ctgtgcaaagaaagttctgtcatccaaagcaagggcttcagaaacaggaggaaaagtgct
aaaggaaatggacaagaaaacttccccttgcaggaagctagtgtgaatattcagcttaca
gatgccaaaatgtgtcacccaagaagcaaaacccagaaatctggttctcaaaagggtaat
atagagtttggctctgaatcatctgaagagttttttaaacaggcaagcaaaactgggttt
gaaggcaaaggagctgttcagatttcttctcaagcaaggctggaagaacttgggagtgct
gagaaagggaatgaaaattcttgtaatgcccagcctgacaagctgggtgccaaagaaata
acactgccaggtatcacaggtgaaggggatttctcaaaggaatgtttgagcaagaagagc
actcagagcatcactgaatgtgccaaacctgaccaagtgaatgtggctggatgccaaaat
tctcctttgggtgttcttgctgtggagctgcccccagagcagggtgacagagcagggggt
gccagtcccaccctgaatggggacacagagggaatggaggaacagcagagccagcacagc
agtgaccaccaagagtcagatttagaggatggctcagagaacaggctggataaaagcagg
ggaatggacactgatgcacagagtgtggaagctgcagaggggtatgagcctgagaatgaa
tcttcccaggacagagaacttcctcaggcagagccccttcactctgcccccctgaacaaa
gtctccaagaagagactgaagcagagcattcagaaagtcaacgaatggttttccaaaagc
aatgagattttgtcttctggttcttcagtggatgaatcagctgcatcagctgatggctca
ggggaaggagatctgtgtttgtcagataaagagtcctgtatttcaggaaggactgaccct
atggcagattccatgggagctgcagcagtggaaggaaaaaagaggtggtcaaaacaaaca
gcagaagacattaaagacaaaatatttggcagaacatacaagagagggaggaaatcaaat
cccccttctaccttgagagacattttgcctgctagacaaaaggaaggtgtggctgctgct
cagggcctgaagggtttcagcaaagacagactcaaacgaaagaggaagagtgcctgcctg
caacctgaggatttcatcaagaaaaaagagacagaaaagggagatgggggccctcaaagt
gttaatgggggccttggagaggctgaagagaaaagctgtgatgaaagtgttgctgttaat
gggagtcacctctctcagaatagagcaaataatacatcaacagagcctgaggagggagga
gagtccacatggaagaaagctgctgagaaggtccctgcccagcactgtgatggggagcca
gaaatgtataactgtgatcagaaaagcaccagaaagagaagttctgcagcaaaaaggtgc
aggcattccagcagaaccatgtgtgctctgcagctggtggtggacagagactctgatttc
cctgacccagccgagccccagattgacagctaccccagcagtgctgagcctgagcaaaac
ccgctgagacgcagcaggaggctccagctgctctctgaagaaatggcaaaagaaacaaga
aaaagagtaaagaagagtaaaaagagaaatggcagtgatcctgggaggtgtgtctctgga
gagcagaggaatgtggcagctccctctgctgagtgcagagagctgagtgagcctcagggt
gagctgagttccaggccagtcactcgtttggagggaggagatctgcaagcagatgaagtg
caggttaatctaaagaatttatctgacactgcaggaactgggcagagtctgttcagtcct
tcaggtctgccttcaaactgtggttccactgtgcctgacacaggttctcaagatagcaga
atatttggtagccccctcctcctgcaagttccttcagtgtctgctgggcaaacggcttct
ccccaggctgaggtgactgagtctcctcctgcttctcccccacagcctggccatgattca
caaaatgctccagggcatttcaaagctgaaaagttgccaatggctaaaaatgttttggaa
ttgagtaaggaagctgaagacagtgacctggacacacaatatctgaggaacatattcagg
cactccaagcgctcctccttcagcctttttcagactcgtgccctggcagatcctccttct
gaaaacttcaatctatcacatgctgctcagggagaaaataaagctagcaaacaattacag
ccagaaagcttgcaagaggagagaactgatcaaaacttgagcagggtttctgagaaagat
gaagagaaagagaagcttaagagctgtgagtctgcacgtgtggatcctgtgccttgcttt
gctgtcagcagggatgatgtttcacaggctgcagaggaagggactctgacaccagcagga
gcagggactgctcaggctgagcacaaaaatggattgctgcaagaggagcagggcattgaa
aagccagtgtcagatgagacagggacagaaagtggtttgggacaaaatcccattgaaagt
gatggaagccagagtgaccagagtaacacagaggggcatgagcccagccaaaatgattta
cacacaggccaggcaaacagcttcagttcagaaagcaatcaggcagcaaagactgaagtg
gttgattgcacagaaccaattctacatttccaatccacatcaacgatttctcctgcagct
tgtcagcaaagccctgctgaactcagctgtgaagtcacgaggacaaaaagtagcagaaga
ggaagaaaatgtgtaaatgggaatgaagaagaagcagcccaaactgttagcacagctgca
gaggctctggaagaacctcttggggagaattgtggccttacaggtttgtctgaaacccct
gatgccctgctgtgctctgagcctgacattgaggagagccccagcctgtgtgacactgac
aggaaggagcaatctgcagtgtttgtgagaagtgacagtgcagagctgcagagcagaaat
gcagattccaaaccaacacctcgaggtcctggaaagcctcgaaggcgagtgcagaaattg
ccatcttcagatgaagagtcctgtgaggatgaggagttgccctgcttcaggacactgatc
ttcagcaaatcagcaagcacccctttgcaggctgatcaacaaatggcacctgaggtggag
cctgcagtggcagagagtccaggcagccccagtgtgggtaacgatggcaatgctctgcag
aaagtgccagaagcttccctaggtcgtgtgtgtgcttcaccaagccaggaatcagaatgc
tctgtcaacttattttcttcccagtccaacatgtctgaggagtcactaaatggggcacaa
gagctgaacaaacatttgccacaagctcaggtgtccaaagaaatgagcagtgtcaatgag
agtaaagaaacttctccgaattctggtggagggctgaaggaaaccaaagatgaaagccaa
gaagatccagacatgggagcaaacctaggtgaaggctgtggatctgacagtgaaatgagt
attgtggaagattcctgtggagctttctctcagggtgaaatcctcaccacccagcaaaag
aatgcaatgcagaaaagcctgaaaaaacttcagcaagaaatggctgcgcttgaagctgtg
ctaaagcagaatgggagccagagctgggaagttttacctgtccagagggagctgccacat
cccagtcctgaaggagcatctgaaatggaacaagcaagaccagaaaaaaccaggtcccca
gaattgctgctttcagcttctaaatcctctttaaggaagagctcaggtctggggaaaggc
cctgagtgtgacagtgcagtacagaacaaaaccccctctgaaaaaacaaaacctgtgcag
gagcacaggcagtgccagctggaagcagaaaatgcagaggagcagaattctgggactgga
caaaacagtgcatcagtgccatcagatctgtttgggaatgtgacccagagttcagataat
tcctcctcctctgcaatgctttttatccctcaaactgcagaagccacagctgggcctgtt
gtggctcagagcactggaaaaagctctggcccaggacacaaatttaaaaaaagtgaattt
tttcctgtacctgttctacacaattcaactgggaaagaaaatgctacaaatccagtgagg
accaagaggaaagaaatgtcaattgtggtctcaggtctgaatcacagtgagcatttggtg
gtccagaagtttgtgaagaaaactcagagcactttatccaatcacattactgcaggaaca
acccatgtcatcatgaaaacagatgaggagctggtgtgtgaacggaccctgaagtatttc
ctgggcattgcaggagggaagtgggtggttggttaccagtggataattcagtcttttaaa
gcaggaaaagtactggatgaggagaactttgaggtcagaggagatgtcatcaatgggagg
aaccatcagggtcccaagagggccagacaggccctgactgcaaagatctttaaagacttt
gagatctgttgctgtggccccttcactgacatgactacagagcagctggagtggatggtg
gagctgtgcggtgcctctgtggtgaagcagcctgggcagttcacaggcacggcaagttct
actgcagttgtggttgtgcagccagatgcttgggaggaaaacacggattatggagcaatc
cagcagcagagcagcgttgccctggtaactcgggagtgggtcctggacagcgtggcttgc
taccagtgccaggagctgagagcttacctcgtgtcctga
DBGET
integrated database retrieval system
