Zonotrichia albicollis (white-throated sparrow): 102065554
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Entry
102065554 CDS
T07911
Symbol
TRAF6
Name
(RefSeq) TNF receptor-associated factor 6 isoform X2
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Pathway
zab04010
MAPK signaling pathway
zab04120
Ubiquitin mediated proteolysis
zab04140
Autophagy - animal
zab04144
Endocytosis
zab04620
Toll-like receptor signaling pathway
zab04621
NOD-like receptor signaling pathway
zab04622
RIG-I-like receptor signaling pathway
zab05132
Salmonella infection
zab05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102065554 (TRAF6)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
102065554 (TRAF6)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102065554 (TRAF6)
04140 Autophagy - animal
102065554 (TRAF6)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
102065554 (TRAF6)
04621 NOD-like receptor signaling pathway
102065554 (TRAF6)
04622 RIG-I-like receptor signaling pathway
102065554 (TRAF6)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
102065554 (TRAF6)
09171 Infectious disease: bacterial
05132 Salmonella infection
102065554 (TRAF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zab04131
]
102065554 (TRAF6)
04121 Ubiquitin system [BR:
zab04121
]
102065554 (TRAF6)
Enzymes [BR:
zab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102065554 (TRAF6)
Membrane trafficking [BR:
zab04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
102065554 (TRAF6)
Ubiquitin system [BR:
zab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
102065554 (TRAF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF6_Z2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-TRAF_2
zf-C3HC4_4
zf-RING_5
PspA_IM30
SlyX
Med21
TRAF3_RING
RING_XB3-XBAT31
zf-RING_11
U-box
DUF4455
Spc29
DUF1664
PUMA_CC
TMF_TATA_bd
CENP-F_leu_zip
zf-C2HC_3
HAP1_N
HMMR_N
ADIP
Sina_ZnF
Cortex-I_coil
Motif
Other DBs
NCBI-GeneID:
102065554
NCBI-ProteinID:
XP_005480205
Ensembl:
ENSZALG00000013599
LinkDB
All DBs
Position
Unknown
AA seq
544 aa
AA seq
DB search
MSLLHSEGSCGAREAESGCCAAMASACSAAAKEESCSGGSSAGSAPASFSDETQGYDVEF
DPPLESKYECPICLMALREAVQTPCGHRFCKACIVKSIRDAGHKCPVDNEILLENQLFPD
NFAKREILSLTVKCPNKGCSMKMELRHLEDHQLQCDFSTVECLQCQGSFPKNRLKEHMTQ
ECPRRQVCCPNCATSMAYEDKELHDQTCPLANIYCEYCNTVLIREQMPNHYNNDCPTAPV
PCFYSAFGCPEKMQRNELARHMQEFTQVHMRMMAQSFQNISVTAANPVPFINGLPFEPLF
SHMSHAAYNCNPEVENFKETIQQLEGRLVRQDHQIRELIAKMETQNTHVAELKRTIRNLE
GKITEMEAQQCNGIYIWKIENFSEHQKAQEEERPVVLHSPGFYTGKPGYKLCLRLHIQLP
TAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLSILDQSEGPERHNHEEVMETKPELLA
FQRPTIHRNPKGFGYVTFMHLETLKQRSFIKDDTVLVRCEVLTRLDLSSVRREGFQARST
DGAM
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgctgcacagcgagggcagctgcggggcccgtgaggcggagagcggctgctgc
gccgccatggccagcgcctgcagcgccgccgccaaggaggagagctgcagcggcggcagc
agcgccggcagcgcgcccgcctccttctccgacgagacgcagggctacgacgtggagttc
gacccgcccctggaaagcaaatatgagtgccccatctgcttgatggctctgcgggaagcg
gtgcagacgccgtgtggccaccgtttctgcaaagcgtgcattgtcaaatccataagagat
gcaggtcacaaatgtcctgtagacaatgaaattctgcttgaaaatcaactttttcctgac
aactttgccaaacgggaaatcctttcattaacagtcaaatgtcccaacaagggctgcagc
atgaagatggagctcaggcacttagaggaccaccagctgcagtgtgatttttccactgtg
gaatgcctgcagtgccaaggatccttcccaaagaaccgactgaaggagcacatgacccaa
gagtgtccgaggcgtcaagtgtgttgcccaaactgtgccacgtccatggcctatgaagat
aaagagcttcatgaccaaacctgtccacttgccaatatatattgtgaatattgcaacaca
gtgctcatcagggagcagatgcctaaccattataacaatgattgtcctactgccccagtg
ccatgtttttacagtgcctttgggtgtcctgaaaagatgcaaaggaatgaactggcacga
catatgcaggagttcactcaggttcacatgaggatgatggctcagagctttcagaatatc
agtgttactgctgcaaatcctgtgcccttcatcaatggcctaccctttgagcccctcttc
tcacacatgtcacatgctgcatacaactgcaatccagaagttgaaaacttcaaggaaact
attcagcagttggaaggtcgtctggtgagacaggatcaccaaatcagggaactcattgct
aaaatggagactcagaacactcacgtggcagaactcaaacgcactatacgaaatttggag
ggaaagattactgaaatggaggcacaacaatgtaatggtatttatatctggaagattgag
aacttcagtgaacatcagaaagcccaggaagaagaaagacctgtagtgctgcacagtcct
ggcttctatacagggaagcctggctacaagctgtgcttgcgcctgcatatccagttaccg
actgctcagcgctgtgctaattatatctctctgtttgtgcacactatgcaaggggaatat
gacagccacctgccctggcctttccaaggcaccatccgactttctattttggatcaatca
gaaggcccagaaaggcacaaccacgaagaggtgatggaaaccaagccagagctactggcc
ttccagagaccgacaatccaccgcaatccgaaaggttttggttacgtgactttcatgcac
ctggagaccttgaagcagagaagcttcatcaaggacgacactgtgctggtgcgctgcgag
gtgctcacgcgcctggacttgagcagtgtccgcagggaaggcttccaggcccgcagcact
gacggggccatgtag
DBGET
integrated database retrieval system
