Zonotrichia albicollis (white-throated sparrow): 102068600
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Entry
102068600 CDS
T07911
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Pathway
zab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102068600 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zab03041
]
102068600 (EFTUD2)
Spliceosome [BR:
zab03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
102068600 (EFTUD2)
Complex C
U5 SnRNP specific factors
102068600 (EFTUD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Septin
FANCL_d3
Motif
Other DBs
NCBI-GeneID:
102068600
NCBI-ProteinID:
XP_014129832
Ensembl:
ENSZALG00000008526
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDDDDDELGREAKDLDELEDDDDDDDMGEHDEEHPGMEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFSLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRDDQDLCYTDILFTEQERGVG
IKSTPVTIVLPDTKGKSFLFNIIDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLVL
SPLLGNVCFSSSQYSICFTLGSFAKIYADTYGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFILEPLYKILAQVVGDVDTTLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKVGAKTKIEHTYTGGVDSDLGEAMSECDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATVTEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKSLLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggacaccgacctgtacgatgagtttggcaattacatcgggcccgagctggactcggac
gatgacgacgacgagctgggccgggaggccaaagatctggacgagctggaggatgatgat
gatgatgatgacatgggagaacatgatgaggagcaccctggcatggaggtggtgctgcat
gaggacaagaagtactaccccacagcagaggaggtctatgggcctgaggtggagaccatc
gtgcaggaggaggacacacagccactcactgagcccatcatcaaacctgtgaaaaccaag
aagttctccctgatggagcagacactgccagtcactgtctacgagatggatttcctggca
gatctgatggacaactcggagctgatccggaatgtgactctgtgtgggcacctgcaccac
ggcaagacgtgttttgttgactgcctgatagagcagacgcaccccgagatccggaaacgc
gacgatcaggatctttgctacactgatatattgttcacagagcaggagaggggagtgggg
atcaagagcaccccagtgacaattgttctgccagacaccaaaggaaaatctttcctcttc
aacatcattgacactccaggtcatgtgaacttctcagacgaggtgaccgctggccttcgc
atctcggacggcgtcgtgctcttcatcgacgcggccgagggggtgatgctgaacacagag
aggctgatcaagcatgcggtgcaggagaggctggctgtgactgtgtgcatcaacaagatt
gacagactcatcctggagctcaaactgccccccacagatgcttactacaagctcagacac
attgtggatgaagttaatggtctgatcagcatgtattccaccgatgagaacctcgtgctg
tctccccttctggggaatgtgtgcttctccagctctcagtacagcatctgcttcacactg
gggtcttttgcaaagatttatgcagacacatatggagacatcaattaccaggagtttgcc
aagcggctttggggcgacatctacttcaacccgaagacgcgcaaattcaccaagaaggcc
ccgacgagcagctcccagcgcagctttgtggagttcattctggagcccctgtacaagatc
ctggctcaggtggtgggggatgtggacacaaccctgcccaggactctggatgagcttggc
atccacctgaccaaggaggaactgaaactgaacatccggcccctcctgcgcctcgtctgc
aagaaattctttggggagttcacaggttttgtggacatgtgtgtgcagcacattccctcc
ccaaaagtgggggccaagaccaaaatcgagcacacctacaccggcggcgtcgactccgac
ctgggcgaggccatgagcgagtgtgaccctgatggtcccttgatgtgtcacaccaccaag
atgtacagcactgatgatggtgtgcagttccacgcctttggcagggtgctcagtggcacc
atccatgctgggcagcctgtgaaggtccttggggagaattacaccctggaggatgaggag
gattcccagatctgcaccgttggacgcctctggatctcagttgcgaggtatcacattgag
gtgaacagagttcctgctggcaactgggtgctgattgagggcgtggaccagcccatagtg
aagacagcaactgtgacagagcctcggggcaatgaggaggctcagatcttccgtcccttg
aagttcaacaccacatctgtgatcaaaatagctgtggagccagtgaacccctcagagctg
cccaaaatgttggatggtcttcgtaaagtcaacaagagctacccctcacttacaaccaag
gtggaagaatctggggagcatgtgatcctgggcacaggagagctgtacctggactgtgtg
atgcacgacctgaggaagatgtactctgagattgacatcaaggtggctgatccagtggtg
acattctgtgagacagtggtggaaacatcctccctgaagtgctttgctgagacacccaac
aagaagaacaagatcacaatgattgctgagcccctggagaagggactggcagaggacatt
gagaatgaagtggtgcagataacatggaacagaaagaagctgggtgaattcttccagacc
aaatacgactgggatttgctggctgcccgttccatctgggcctttgggcctgatgccact
ggcccaaacatcctggttgatgacacactgccctcagaggtggacaagtctctgctgggt
tcagtgaaggacagcatcgtgcagggcttccagtgggggaccagggaagggcctctctgt
gatgaattgatccgcaacgtgaagttcaagatcctggacgcagtgattgctcaggagccc
ttgcacaggggtggagggcagatcatccccacggcccgcagggtggtgtactctgccttc
ctcatggccacccctcgtctgatggagccctactactttgtggaggtgcaggctcctgct
gactgtgtgtctgctgtgtacaccgtgctggcccggcgcagaggccacgtcacccaggat
gctccaatcccaggctctcccctgtacaccatcaaagccttcatcccagccattgattcc
tttggctttgagacagacttgaggacccacacacagggccaagccttctccctgtctgtc
ttccaccactggcagatcgtgcctggggaccccttggacaagagcatcgtcatcaggccg
ctggagccgcagccagccccacacctggccagggagttcatgatcaagaccaggcgtagg
aagggcctcagtgaggatgtgagcatcagcaagttctttgatgaccccatgttgctggag
ctggccaagcaggacgtcgttctcaactaccccatgtaa
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