Zonotrichia albicollis (white-throated sparrow): 102073041
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Entry
102073041 CDS
T07911
Symbol
SCN4A
Name
(RefSeq) sodium channel protein type 4 subunit alpha
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
zab04040
]
102073041 (SCN4A)
Ion channels [BR:
zab04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
102073041 (SCN4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
102073041
NCBI-ProteinID:
XP_005496493
Ensembl:
ENSZALG00000007710
LinkDB
All DBs
Position
Unknown
AA seq
1846 aa
AA seq
DB search
MAGLPHIPGPENLRPFTPASLAAIEQRMAEAEALRIKRQQVEMPEEEEIKPSSDLEAGKN
LPLIYGDPPAELIGTPLEDLDPFYKDKKTFIVLNKGKSIFRFSATPALYMLGPFNPIRRG
AIKVLIHSLFSMFIMITILTNCVFMTMSNPPPWSKNVEYAFTGIYTFESLIKILSRGFCI
DDFTFLRDPWNWLDFMVISMAYITEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGAL
IQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCVRWPPPNSTFLQDLGLDNDTSAN
STFYDFMDDFTGNFTGNFTGNFTGNFTGSTFDFEAYISDEANYYFLEGALDALLCGNSSD
AGKCPEGYECMKAGRNPNYGYTSYDTFSWAFLALFRLMTQDFWENLFQLTLRAAGKTYMI
FFVVVIFLGSFYLINLILAVVAMAYAEQNDATMLEEQQKEEEFQQLMEQLKKQQEEQERL
LQERSSSSNSLPSSVAGKGQDSDLNSDQDKAKDCNGQVVPKITLQRADTVVDFNSTHELE
KPDLNHLTVGNQDGPGLEKRVGSAISVISNAVEELEEAHQKCPPWWYKFAHTFLVWNCCL
PWVKLKEFVKLVVMDPFVDLGITICIVLNTLFMAMEHYPMTEEFENVLSVGNLVFTGIFT
AEMVLKLIALDPYEYFQQGWNIFDSFIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKS
WPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYIECVCKISVDCTLPRW
HMNDFFHSFLIVFRILCGEWIETMWDCMEVAGQTMCLIVFMMVMVIGNLVVLNLFLALLL
SSFSADSLAASDDDGEMNNLQIAIGRITRGIALGKAALLALLRRLCKGKKVAPEEEQEPS
KRDNPALNHLDTALEPKSGYLDGITGKEHIFMDELEHMNFINNPSLTVQVPIASEESDLY
EETSTQSDTEDTSKNPLSSDNASSVCSTVDYKPPAPEEEEVAEEAEESNEPEECFTEGCV
KRFPCLYVDITSEKGKIWWNLRKTCFRIVEHDWFETFIVFMILLSSGALAFEDIYIEQRK
VIRTILEYADKVFSYIFVIEMLLKWVAYGFKVYFTNAWCWLDFLIVDVSLVSLTANWLGY
SELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGV
NLFAGKYYRCVNTTTGELFEINVVNNKSDCMALLYTNEVRWVNVKVNFDNVGLGYLSLLQ
VATFKGWMDIMYAAVDSREIEEQPQYEINLYMYIYFVIFIIFGAFFTLNLFIGVIIDNFN
QQKKKFGGKDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPANKIQGKVFDFVTKQVFDITI
MILICLNMVTMMVETDDQSELKTSVLYKINLVFIVIFTGECVLKMFALRHYFFTVGWNIF
DFVVVILSILGIVLSDIIEKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSL
PALFNIGLLLFLVMFIYSIFGMSNFAYVKKESGIDDIFNFETFGNSIICLFQITTSAGWD
GLLNPILNSGPPDCDPELENPGSSVKGDCGNPAIGIFFFCSYIIISFLIVVNMYIAIILE
NFSVATEESSEPLCEDDFEMFYETWEKFDPDATQFIAYSTLSDFVDTLQEPLRVPKPNKI
KLITMDLPMVAGDKIHCLDILFALTKEVLGDSGEMDALKATMEEKFMAANPSKVSYEPIT
TTLKRKHEEVCAIRIQRAFRRYLLRRSVKQASYMYRHSQDTLGEDAPEKEGLIATKMQEI
YGNSGTDVETAPALGLKPIPSSETPQDAPEEAQVWRKEHVVKESLV
NT seq
5541 nt
NT seq
+upstream
nt +downstream
nt
atggccggcctgccgcacatcccgggccccgagaacctgcgccccttcacgcccgcctcg
ctggccgccatcgagcagcgcatggccgaggccgaggcactccgcataaagaggcagcag
gtggagatgcccgaggaggaggagatcaagcccagcagtgacctggaagccggcaagaac
ttgcccctcatctatggcgacccacccgcggagctcatcgggaccccgctggaggacctg
gaccctttctacaaggacaagaagacattcatagtcctcaacaagggcaaatccatcttt
cgcttctcggccacccctgccctctacatgctggggcccttcaaccccatccgcagagga
gccatcaaagtcctcatccattcattattcagcatgttcatcatgatcaccattttaacc
aactgcgtgtttatgacgatgagcaaccccccgccgtggtccaagaacgtggaatacgct
ttcactgggatctacacctttgagtctctcatcaagatcctgtccagaggcttctgcatc
gacgacttcacattcctgcgtgacccgtggaactggctggacttcatggtcatctccatg
gcctacatcaccgagttcgtggacctggggaacatctctgctctcaggaccttccgtgtc
ctccgtgccttgaaaaccatcacggtgataccagggctgaagaccatcgtgggggccctg
atccagtcggtgaagaagctctcggacgtgatgatcctcacggttttctgcctgagcgtc
ttcgccctcatcggcctgcagctcttcatgggcaacctgcggcagaagtgcgtacgctgg
cctccccccaacagcaccttcctgcaggacctggggctggacaacgacacctcggccaac
tccaccttctacgacttcatggacgacttcactgggaacttcaccgggaatttcactggg
aacttcaccgggaacttcaccgggagcacctttgactttgaggcctacatcagtgatgaa
gccaattactacttcctggagggagctctggatgccttgctctgcgggaacagcagtgat
gctgggaagtgccctgagggctacgagtgcatgaaggccgggaggaaccccaactatggc
tacaccagctacgacaccttcagctgggccttcctggccctcttccgcctcatgacccag
gacttctgggagaacctcttccagctgacactgcgggcagcagggaaaacctacatgatc
ttcttcgtggtggtcatcttcctgggctccttctacctcatcaacctcatcctggccgta
gtggccatggcttatgccgagcagaacgatgccaccatgctggaggagcagcagaaggag
gaggaattccagcagctcatggaacagctgaagaagcagcaagaggagcaggaaaggctg
ttgcaggaacgctcatccagcagcaattccctgcccagcagcgtggccgggaagggacag
gactcggacctcaacagtgaccaggacaaggccaaggactgcaacgggcaggtggtgccc
aagatcactctgcagagagccgacactgtggttgatttcaactccacccatgagctggag
aagccagacctcaaccacctcactgtgggcaaccaggatgggccagggctggagaagagg
gtgggaagtgccatcagtgtcatctccaacgctgtggaagagctggaagaagctcaccag
aaatgcccaccctggtggtacaaattcgcccacacattcctggtctggaactgctgcctt
ccctgggtgaagctgaaggagtttgtcaagctggtggtgatggacccctttgtggacctg
ggcatcaccatctgcatcgtgctcaacactctcttcatggccatggagcactaccccatg
acagaggagtttgagaatgttctgagcgtggggaacctggttttcacagggatcttcacg
gcagagatggtcctgaagctcattgctctggatccctacgagtatttccagcagggctgg
aacatctttgacagcttcatcgtcaccctgagcctggtggagctgggcctggccaacgtg
caggggctctccgtgctgcgctccttccgcctgctgagggttttcaagctggccaagtcc
tggcccactctcaacatgctcatcaagatcatcggcaactccgtgggcgccctgggcaac
ctgacgctggtcctggccatcattgtcttcatctttgccgtggtggggatgcagctcttc
ggcaagagctacatagagtgcgtgtgcaagatctctgtggactgcaccctgccccgctgg
cacatgaatgacttcttccactccttcctcatcgtcttccgcatcctctgcggggagtgg
atcgagaccatgtgggactgcatggaggtggccggccagaccatgtgcctcatcgtcttc
atgatggtcatggtcatcggcaacctcgtggtgctaaacctgtttctggctctgctgctg
agctccttcagcgccgacagcctggcagcatcagacgatgacggggagatgaacaacctg
cagatcgccatcggccgcatcacgcgcggcatcgccctgggcaaggccgcactgctggcg
ctgctgcgccgcctctgcaagggcaagaaggtggcacccgaggaggagcaggagcccagt
aagagggacaaccccgcactcaaccacctggacacggccctggagcccaagtcggggtac
ctggacggcatcacgggcaaggagcacatcttcatggatgagctggagcacatgaacttc
atcaacaaccccagcctgacggtgcaggtccccattgcctccgaggagtctgacctctac
gaggagaccagtacacagtctgacactgaggacaccagcaagaaccccctgagcagtgat
aacgcctcgtccgtgtgcagcacagtggattacaaaccccctgcacccgaggaggaggag
gtggcagaagaggctgaggagagcaatgagcctgaggagtgtttcactgaaggctgtgtg
aagaggttcccctgcctctacgtggacatcaccagtgagaaggggaagatctggtggaac
ctcaggaaaacctgcttccgcatcgtggagcacgactggttcgagaccttcatcgtcttc
atgatcctcctcagcagtggagctctggctttcgaggacatctacattgagcagcgcaag
gtgatccgcaccatcctggaatacgcagacaaggtcttctcctacatctttgtcatcgag
atgctgctcaagtgggtggcctatggcttcaaggtgtacttcaccaatgcctggtgctgg
ctggatttcctcatcgtggatgtgtccctggtcagcctgacagcaaactggctgggatac
tccgagttgggagccatcaaatccctgcggacactgagggctctgcgacccctgcgtgct
ctgtcccgcttcgagggcatgagggtggtggtgaacgccctggtgggtgccatcccctcc
atcatgaatgtcctgctggtctgcctcatcttctggctgatcttcagcatcatgggggtg
aacctgtttgcagggaagtattacaggtgtgtcaacaccaccactggggagctcttcgag
atcaatgtggtcaacaacaagagcgactgcatggccctgctctacaccaacgaggtcaga
tgggtcaatgtcaaggtcaacttcgacaatgtgggcctgggatacctgtccctgctgcag
gtggcaaccttcaaaggctggatggacatcatgtatgcagctgtggactcccgtgagatt
gaagagcagccacagtatgagatcaacctctacatgtacatctacttcgtcatcttcatc
atcttcggggccttcttcaccctgaacctcttcatcggtgtcatcatcgacaactttaac
cagcagaagaaaaaatttggaggcaaagacatcttcatgacagaagagcagaagaaatac
tacaatgccatgaagaagctgggctccaagaaaccccagaagcccatccccaggccagcg
aacaaaatccaagggaaggtgtttgacttcgttaccaagcaagtgtttgacatcaccatc
atgatcctgatctgtctgaacatggtgaccatgatggtggaaacagatgaccagagcgag
ctcaaaacctctgtcctctacaagataaacctggtcttcatcgtcatcttcaccggcgag
tgcgtgctcaagatgttcgccctgcgccactacttcttcactgtgggctggaacatcttt
gacttcgtggtggttatcctctccatcctaggtatcgtcctctcagacatcattgagaag
tactttgtgtcccccacactcttcagggtgatccggctggcgaggattggccgtgtgctg
cggctgatccgaggagccaaaggcatccgcacgctcctctttgcgctgatgatgtccctg
cccgccctgttcaacattggcctcctgctcttcctcgtcatgttcatctactccatcttc
ggcatgtccaacttcgcctacgtcaagaaggagtcggggatcgatgacatcttcaacttc
gaaaccttcgggaacagcatcatctgcctcttccagatcaccacatcagcagggtgggat
gggctcctcaaccccatcctcaacagcggcccccccgactgcgatcccgagctggagaac
cccgggagctcggtgaagggagactgtgggaaccccgccattggcatcttcttcttctgc
agctacatcatcatctccttcctcatcgtggtgaacatgtacattgccatcatcctggag
aacttcagcgtggccacggaggagagcagcgagcccctctgcgaagacgattttgaaatg
ttttatgaaacctgggagaagttcgaccctgacgccacccagttcatcgcctacagcacc
ttgtctgactttgtggacaccttgcaggagccactccgagttcccaagcccaacaagatc
aaactcatcaccatggatctaccaatggttgctggggacaaaatccactgcctagacatc
ctctttgccctgactaaggaagtgctgggagactcgggcgagatggatgccctgaaggcc
accatggaggagaagttcatggctgccaacccctcgaaggtttcctatgagcccatcacc
accaccctgaagaggaagcacgaggaggtgtgtgctatcaggatccagagggcgttccgg
aggtacctcctgcggcgctcggtcaagcaggcctcctacatgtacaggcacagccaggac
acgctgggcgaggacgcgcccgagaaggaagggctgatcgccaccaaaatgcaggagatc
tatgggaactctgggacagatgtggagacagcccctgccctgggcctcaagcccattccc
agctcagagacgccccaggatgctcctgaggaagcacaggtttggcgtaaggaacacgtg
gtgaaagagtcgctggtgtaa
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integrated database retrieval system
