Zonotrichia albicollis (white-throated sparrow): 106629860
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Entry
106629860 CDS
T07911
Symbol
TDG
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Pathway
zab03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
106629860 (TDG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zab03400
]
106629860 (TDG)
Enzymes [BR:
zab01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
106629860 (TDG)
DNA repair and recombination proteins [BR:
zab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
106629860 (TDG)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
GAGA_bind
Motif
Other DBs
NCBI-GeneID:
106629860
NCBI-ProteinID:
XP_014128039
Ensembl:
ENSZALG00000001621
LinkDB
All DBs
Position
Unknown
AA seq
402 aa
AA seq
DB search
MEGPELGRYYAYLQQAQAFYSFPFHQMMTAVPSMEMMTEQPALDSIPETNIAQEPPKEVK
KGGRKRKAKATEPKQPKKPAAKKEKPAKSKGKQEKITDTFKVKRKVDRFNGVSEAELLTK
TLPDILTFDLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFMSGLSNEQLNHMDDHTLP
HKYGIGFTNMVERTTPGSKDLSSKEFREGGRILMQKLQKYKPRIAAFNGKCIYEIFSKEV
FGIKVKNLEFGLQPHKVPDTETLCYVMPSSSARCAQFPRAQDKVHYYIKLKDLRDQLKGI
APNMEVQEVQYTFDLQLAQEDAKKMAVKEEKYDPGYEAAYGGAYCDRALYDTDQCSLSSD
GTAGSNPQYCKGSSFGEVPNGQWMTQSFADQIPEFNAGMTQE
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggagggcccggagctgggcagatactacgcatatcttcagcaagctcaagcattttac
tcgtttccattccatcagatgatgactgcagtgcccagcatggaaatgatgactgagcag
ccagctctagacagcattccagagacaaacattgctcaggagcctccaaaagaagttaaa
aaagggggaaggaaaagaaaagccaaagcaactgagccaaagcaacccaaaaagcctgct
gctaaaaaagaaaaaccagccaagtccaaaggcaaacaagaaaagatcacagatactttt
aaagtcaaaagaaaagtggaccgttttaatggtgtatctgaagctgagcttctgaccaag
actttgcctgatattttgacctttgatctggatattgtgataattggcataaaccctggc
ctgatggcagcttacaaaggacatcattacccaggacctggaaatcatttttggaagtgt
ctgttcatgtctggtctgagtaatgaacagctgaatcacatggatgaccacaccttgcca
cataaatatgggattggatttacaaacatggttgaaaggacaacacctggaagcaaagac
ctctccagcaaagagtttcgggaaggagggcgaattctgatgcagaagctacaaaagtat
aaacctcgtatagcagcttttaatggaaaatgtatttatgaaatttttagtaaagaagtt
tttggaattaaagtaaagaacttggaatttggactgcagccacacaaagtgccagataca
gaaactctctgctatgttatgccatcttccagtgcaagatgtgctcagtttcctcgggca
caagataaagtacattattacattaagctgaaagacttaagggatcaactgaaaggcatc
gcacccaacatggaggtccaggaggtgcagtacacatttgacttgcaacttgcacaagag
gatgctaaaaagatggctgtcaaagaagaaaagtatgacccaggctatgaagcagcatat
ggaggagcttactgtgaccgtgcgctgtatgacactgaccagtgcagcttgtcttcagat
gggactgcaggaagcaatccacagtactgcaaaggctcgtccttcggtgaggttcctaat
ggacagtggatgacacagtcctttgcagaccagattccagagttcaatgctggcatgaca
caagaatag
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integrated database retrieval system
