Zalophus californianus (California sea lion): 113908023
Help
Entry
113908023 CDS
T07874
Symbol
SMCR8
Name
(RefSeq) guanine nucleotide exchange protein SMCR8 isoform X1
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca04140
Autophagy - animal
zca05014
Amyotrophic lateral sclerosis
zca05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
113908023 (SMCR8)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
113908023 (SMCR8)
05022 Pathways of neurodegeneration - multiple diseases
113908023 (SMCR8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zca04131
]
113908023 (SMCR8)
Membrane trafficking [BR:
zca04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
113908023 (SMCR8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMCR8_C
Folliculin
Motif
Other DBs
NCBI-GeneID:
113908023
NCBI-ProteinID:
XP_027423692
UniProt:
A0A6J2B0G3
LinkDB
All DBs
Position
16:complement(11593055..11605912)
Genome browser
AA seq
936 aa
AA seq
DB search
MISAPDVVAFTKEEEYEEEPYNEPALPEEYSVPLFPFASQGANPWSKLSGAKFSRDFILI
SEFSEQVGPQPLLTIPNDTKVFGTFDLNYFSLRIMSVDYQASFVGHPPGSAYPKLNFVED
SKVVLGDSKEGAFAYVHHLTLYDLEARGFVRPFCMAYISADQHKIMQQFQELSAEFSKAS
ECLKTGNRKAFAGELEKKLKDLDYTRTVLHTETEIQKKANDKGFYSSQAIEKANELASVE
KSIIEHQDLLKQIRSYPHRKLKGSPLCSGETEHTQDQASQAATTSNPDESADPDLYTCRP
AYTPKLIKAKSTKCFDKKLKTLEELCDTEYFTQTLAQLSHIEHMFRGDLCYLLTSQIDRE
LLKQQHITNFLFEDFAEVDDRVAEKEESAPPRPVPGRPPSRSLEECPIPQVLISVGSYKS
SVESVPIKMEQELGDEYREAEVTEVSSFDPQENLDFLDTDMKGSISSGESIEVLGTEKST
PVLPKSDSQTSLTVPLSPQVVRSKAVSHRTISEDSIEVLSTCPSEALIPDDFKASYPSAI
NEEESYADDSEGAIHFQASVSPPELGEAEEGSLENPLSQIDSSCCIGKESDSLRVPLSTP
AHTPSERDGVVSIPPQRCMQKDQGFHVDFAVENASPSRDNSSEGFPADELDPNRLLASRD
ASKTSLDNCSDTTSNMSSVASTSSDRTPSSAHPTGPSSERHKKRAGQNALKFIRQYPFAH
PAIYSLLSGRTLVVLGEDEAIVRKLVTALSIFVPSHSRFAKPVKHWVSSPLHIMDFQKWK
LIGLQRVASPAGAGTLHALSRYSRYTSVLDLDNKALRCPLYRGTLVPRLADHRTQIKRGS
TYYLHVQSMLTQLCSKAFLYAFCHHLHLPAHDKETKEVVASRQASFLKLNLGLVNEDVKV
VQYLAELLKLHYTQEAPGTSHPTLRFDYVPSFLYKI
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgatcagcgcccctgacgtggtggccttcaccaaagaggaggagtacgaggaggagcct
tacaatgagcccgccttgcccgaggagtactcggtgccactcttccccttcgccagccag
ggagccaacccatggtccaaactgtccggggccaagttctcgcgggacttcatccttatt
tccgagttctccgagcaggtgggaccccaacccttgctgaccatccccaatgacaccaaa
gtttttggtactttcgatctcaattacttctccttgcggatcatgtctgtggattaccag
gcctcctttgtgggccatccccctggttctgcctaccccaagctgaactttgtggaggac
tccaaggtggtgctgggagactccaaggagggagcctttgcgtatgtgcaccaccttacc
ctgtacgacctggaggcccggggctttgtgaggcccttttgcatggcttatatctcagcg
gaccagcacaaaatcatgcagcagtttcaggagctctcagctgaattttccaaagcttcc
gagtgcctgaagacaggcaacaggaaagcatttgcgggagaacttgaaaaaaaactgaaa
gacttggattacaccaggacagtgctgcacacggaaacggagatccagaagaaggccaat
gacaaaggcttttactcatctcaggcaattgagaaagccaatgaattggctagtgtggag
aagtccatcattgaacatcaagacctgctgaagcagatccgctcgtaccctcatcggaag
ttgaaggggtctcctttgtgttctggggagacggagcacacccaggatcaggccagccag
gcagccactacctctaaccctgatgagtctgctgacccagacctttacacctgcagacct
gcttataccccgaaactcatcaaagcaaagtccaccaagtgttttgacaagaagttgaag
accctggaagagctctgtgacactgagtatttcacccagaccttggctcagctcagccac
atagagcacatgttcagaggagacctgtgctacctcctgaccagccagattgacagagaa
cttctaaaacaacagcatataacaaacttcctctttgaagattttgcggaggtcgatgac
agggtggcagagaaagaagagagcgcaccccctaggcccgttcccggcaggccgccttct
aggtctctggaagaatgtccgattcctcaagtgttaattagcgttggttcctacaagtcc
agtgtggagtccgtgccgatcaagatggagcaggaacttggagatgagtacagggaagcg
gaggtgacagaagtgagcagttttgacccccaggaaaacttggatttcctggatacggat
atgaaagggagcatcagcagtggcgaaagcatcgaggttctgggcacggagaagtccacc
cctgtgctgcctaagtctgacagccagaccagcctcacggtgccattgagcccccaggtg
gtccggagcaaagcggtcagccacaggaccatcagcgaggacagtattgaagtcctcagc
acctgcccctcggaggccctcatcccggacgattttaaggccagctacccaagtgccatt
aacgaagaagaatcgtatgcagatgatagtgagggagccatccacttccaggcaagcgtc
agcccgccggagctgggtgaagcagaggagggcagcttagaaaatcccctgtcacaaata
gactcctcctgctgcattgggaaggagagtgacagtctgcgggtgcccctctccactcca
gcccacaccccctcggagcgggacggagtagtgagcatccctccgcagcgctgtatgcag
aaggaccaggggttccacgtggactttgccgtggaaaatgccagcccttcccgagacaac
agttccgaaggcttccctgctgatgagctggatccgaaccgcctgctggcgagccgggat
gccagtaagaccagcctggacaactgctcagacactaccagcaacatgagcagtgtagcc
tccaccagctcggacaggactccctcttctgctcaccccaccggcccctcttccgagagg
cataaaaagagggctggccagaacgccttaaaattcatccgtcagtacccctttgcccac
ccggccatctactccttgctcagcgggaggacacttgtcgtcctaggggaggatgaggcc
atagtgagaaagctggtgacagcgctgtccatctttgtccccagccacagccgtttcgcc
aagccggtgaagcactgggtctcctctcctttgcatatcatggattttcagaagtggaag
cttattggcctgcagagagtggcgtcccctgccggcgccggcaccctccacgccctgagc
cgctacagccgctacaccagcgtcctggacctggacaacaaagccctccgctgccccctc
tacagaggcaccctggtgccccggctggccgaccaccgcactcagatcaagcggggcagc
acctactatctgcacgtccagagcatgctcacccagctctgctccaaggccttcctctac
gccttctgccaccacctgcacctgcccgcccatgacaaggagaccaaggaagtggttgcc
agccgccaggcgagcttcctgaagctgaacctgggcctggtgaacgaagatgtgaaggtg
gtccagtacctggccgagctgctgaagctgcactacacgcaggaggctcccgggaccagc
caccccacactcaggttcgactacgtccccagcttcttgtacaagatctga
DBGET
integrated database retrieval system
