Zalophus californianus (California sea lion): 113908849
Help
Entry
113908849 CDS
T07874
Symbol
THBS1
Name
(RefSeq) thrombospondin-1
KO
K16857
thrombospondin 1
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca04015
Rap1 signaling pathway
zca04115
p53 signaling pathway
zca04145
Phagosome
zca04148
Efferocytosis
zca04151
PI3K-Akt signaling pathway
zca04350
TGF-beta signaling pathway
zca04510
Focal adhesion
zca04512
ECM-receptor interaction
zca04820
Cytoskeleton in muscle cells
zca05144
Malaria
zca05165
Human papillomavirus infection
zca05205
Proteoglycans in cancer
zca05206
MicroRNAs in cancer
zca05219
Bladder cancer
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
113908849 (THBS1)
04350 TGF-beta signaling pathway
113908849 (THBS1)
04151 PI3K-Akt signaling pathway
113908849 (THBS1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113908849 (THBS1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
113908849 (THBS1)
04148 Efferocytosis
113908849 (THBS1)
09143 Cell growth and death
04115 p53 signaling pathway
113908849 (THBS1)
09144 Cellular community - eukaryotes
04510 Focal adhesion
113908849 (THBS1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
113908849 (THBS1)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
113908849 (THBS1)
05205 Proteoglycans in cancer
113908849 (THBS1)
09162 Cancer: specific types
05219 Bladder cancer
113908849 (THBS1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
113908849 (THBS1)
09174 Infectious disease: parasitic
05144 Malaria
113908849 (THBS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zca04131
]
113908849 (THBS1)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
zca00536
]
113908849 (THBS1)
Membrane trafficking [BR:
zca04131
]
Endocytosis
Phagocytosis
Opsonins
113908849 (THBS1)
Glycosaminoglycan binding proteins [BR:
zca00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113908849 (THBS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
TSP1_CFP_C
cEGF
EGF_3
EGF_CA
TSP1_ADAMTS
TSP1_CCN
EGF
Laminin_G_3
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
113908849
NCBI-ProteinID:
XP_027425177
UniProt:
A0A6J2B4M6
LinkDB
All DBs
Position
6:81807673..81823568
Genome browser
AA seq
1170 aa
AA seq
DB search
MGLAWGLSVLFLLHACGSSRIPESGGDNSVFDIFELTGAARKGSGRRLVKGPDPSSPAFR
IEDANLIPPVPDDKFQDLVDAVRAEKGFLLLASLRQMKKTRGTLLAIERKDHSGQVFSVV
SNGKAGTLDLSLTVQGMQHVVSVEEALLATGQWKSITLFVQEDRAQLYIGCEKMENAELD
VPVQSIFTRDLATTARLRVAKGGVNDNFQGVLQNVRFVFGTTPEAILRNKGCSSATSVLL
TLDNNVVNGSSPAIRTNYIGHKTKDLQAICGISCDELSSMVLELRGLRTIVTTLQDSIRK
VTEENKELAIELRRPPLCYHNGVQYRNNEEWTVDSCTECHCQNSVTICKKVSCPIMPCSN
ATVPDGECCPRCWPSDSADDGWSPWSEWTSCSATCGNGIQQRGRSCDSLNNRCEGSSVQT
RTCHIQECDKRFKQDGGWSHWSPWSSCSVTCGDGVITRIRLCNSPSPQMNGKPCEGEARE
TKACQKDACPINGGWGPWSLWDLCSVTCGGGVQKRSRLCNNPTPQFGGKDCVGDATENQI
CNKQDCPIDGCLSNPCFAGVKCTSYPDGSWKCGACPPGYSGNGVQCQDVDECREVPDACF
HHSGEHRCENTDPGYNCLPCPPRFTGTQPFGQGVDYATAHKQVCKPRNPCTDGTHDCNKN
AKCSYLGHYSDPMYRCECKPGYAGNGIICGEDTDLDGWPNEDLVCVANATYHCKKDNCPN
LPNSGQEDYDKDGSGDACDDDDDNDKIPDDRDNCPFHYNPAQYDYDRDDVGDRCDNCPYN
HNPDQADTDNNGEGDACAADIDGDGILNERDNCQYVYNVDQRDTDMDGVGDQCDNCPLEH
NPDQLDSDSDRIGDTCDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDACDHDDDN
DGIPDDRDNCRLVPNPDQKDSDGDGRGDACKDDFDHDNVPDIDDICPENIDISETDFRRF
QMIPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGYDEFNAVDFSGTFFINTERDD
DYAGFVFGYQSSSRFYVVMWKQVTQSYWDTNPTRAQGYSGLSVKVVNSTTGPGEHLRNAL
WHTGNTPGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGFIRVVMYEGKKIMADSGPIYD
KTYAGGRLGLFVFSQEMVFFSDLKYECRDS
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atggggctggcctggggactcagtgtcctattcctgttgcatgcatgtggctccagccgc
attcctgagtctgggggagacaacagcgtgttcgacatctttgaactcaccggggctgcc
cgtaagggctccgggcgccgcctggtgaagggtcctgacccttccagcccagctttccgc
attgaggatgccaacctaatcccccccgtgcctgatgacaagttccaagacctggtggat
gctgtgcgggcagagaaaggcttccttctcttggcctccctgaggcagatgaagaagacc
cgaggcacgctgctggccatagaacggaaagaccactcgggccaggtcttcagtgtggtc
tccaatggcaaagcgggcaccttggacctgagcctgaccgtgcaggggatgcaacacgtg
gtgtcggtggaagaagcgctgctggcgaccggccagtggaagagcatcaccctgtttgtg
caggaggaccgggcccagctgtacattggctgtgagaaaatggagaacgcagagctggac
gtccccgtccagagcatcttcaccagggacctggccaccacggccaggctccgcgtcgca
aaaggaggggtcaatgacaatttccagggggtgctgcagaacgtgaggtttgtctttgga
actacaccagaagccatcctcaggaataaaggctgttcgagcgccaccagtgtccttctc
accctcgacaacaacgtggtaaacggctccagccctgccatccgcactaactacattggc
cacaagacgaaggatctgcaggccatctgcggcatctcctgcgatgagctgtccagcatg
gtcctggagttgaggggcctgcgcaccatcgtgaccacgctccaggacagcatccgcaaa
gtgactgaagagaacaaagagttggccattgagctgaggaggcctcccctctgctaccac
aatggagtccagtacagaaataatgaggagtggaccgtggatagctgcaccgagtgccac
tgccagaactccgttaccatctgcaagaaagtgtcctgccctatcatgccctgctccaat
gccactgtccctgacggagaatgctgtccacggtgttggcccagcgactctgcggatgac
ggctggtccccatggtccgagtggacctcctgctctgcgacctgtggcaatggaatccaa
cagcgcggtcgctcctgtgacagcctcaacaaccgatgcgagggctcctccgtccagacg
cggacgtgccatattcaggagtgcgataagagatttaaacaggatggcggctggagccac
tggtccccatggtcgtcttgttccgtgacctgtggcgatggtgtgatcacaagaattcga
ctctgcaattctccgagcccccagatgaacgggaagccatgtgaaggcgaagcccgggag
accaaagcctgccagaaagacgcctgccccatcaatggaggctggggtccctggtcactg
tgggacctctgttctgtcacctgtggaggaggggtgcagaaacgtagccggctctgtaac
aaccccacaccccagtttggaggcaaggactgtgtcggtgacgcgacagaaaaccagatc
tgcaacaagcaggactgcccaattgacggatgcttgtccaatccctgctttgctggggtc
aaatgcacgagttacccagacggcagctggaagtgcggtgcctgtcccccgggctacagc
ggaaatggcgtccagtgccaagacgtggatgagtgcagagaagtacctgacgcctgcttc
caccacagcggcgagcaccggtgtgagaacacggaccccggctacaactgcctgccctgc
ccgccgcgcttcacgggcacgcagcccttcggccagggtgtggactacgccactgcccac
aaacaggtgtgcaagccgcgcaacccctgcacggacgggacgcacgactgcaacaagaat
gccaagtgcagctacctgggccactacagcgaccccatgtaccgctgcgagtgcaagccc
ggctacgcgggcaatggcatcatctgtggggaggacacggacctggatggatggcccaac
gaggacctggtgtgcgtggccaatgccacctaccactgcaaaaaggataactgccccaac
ctgcccaactccgggcaggaggactatgacaaggacgggagcggcgacgcctgtgatgac
gatgatgacaatgataaaatcccagacgacagggacaactgccccttccattacaaccca
gcccagtatgactatgaccgagatgatgtgggagaccgctgtgacaactgcccctacaac
cacaacccagatcaggctgacacggacaacaacggggaaggagatgcctgtgccgcagac
atcgatggggacggtatcctcaatgaacgagacaactgccagtatgtctacaacgtggac
cagagggacacggatatggatggggttggagatcagtgtgacaactgccctctggaacac
aatccagatcagctcgactctgactcagaccgcattggagatacctgtgacaacaatcag
gatattgatgaagatggccaccagaacaacctggacaactgtccctatgtgcccaatgcc
aaccaggctgaccatgacaaagatggcaagggagatgcctgtgaccatgatgatgacaat
gatggcattcctgatgatagggacaactgcagactcgtgcccaatcctgaccagaaggat
tctgatggtgatggtcgaggtgatgcttgcaaagatgactttgaccatgacaatgtgcca
gacatcgatgacatctgtcctgaaaacattgatatcagcgagactgatttccgccgattc
cagatgattcctctagatcccaaagggacatcccagaatgaccctaactgggttgtacgc
catcagggtaaagaacttgtccagaccgtcaactgtgatcctggacttgctgtaggttat
gatgagtttaatgccgtggacttcagtggcaccttcttcattaacactgaaagggatgac
gactatgctggatttgtgtttggctaccagtctagcagccgcttttatgtcgtaatgtgg
aagcaagtcacccagtcttactgggacaccaaccccactagggctcagggatactcaggc
ctttctgtgaaagtcgtgaactctaccaccgggccaggagagcatctgcggaatgccctg
tggcacacgggaaacaccccaggccaggttcgcactctgtggcatgaccctcgtcacata
ggctggaaagatttcactgcctacagatggcgtctcagccaccggcccaagaccggcttc
attagagtggtgatgtatgaagggaagaaaatcatggctgactcaggacccatctatgac
aaaacctatgctggtggtaggctagggttgtttgtcttctctcaagaaatggtgttcttc
tccgacctgaaatacgaatgcagagattcctaa
DBGET
integrated database retrieval system
