Zalophus californianus (California sea lion): 113913300
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Entry
113913300 CDS
T07874
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca03018
RNA degradation
zca03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113913300
09123 Folding, sorting and degradation
03018 RNA degradation
113913300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zca03019
]
113913300
03041 Spliceosome [BR:
zca03041
]
113913300
Messenger RNA biogenesis [BR:
zca03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113913300
mRNA degradation factors
5'-3' decay
Lsm complex
113913300
Spliceosome [BR:
zca03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
113913300
Complex C
U2 snRNP components
113913300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
vATP-synt_E
DUF150_C
FSH1
YfkB
Motif
Other DBs
NCBI-GeneID:
113913300
NCBI-ProteinID:
XP_035579949
UniProt:
A0A6P9F2A1
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All DBs
Position
14:72712331..72712627
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AA seq
98 aa
AA seq
DB search
MADDMDQQQTTNTVEEPLDLIRLSLDEQIYVKMRNDRELRGRLHAYDQHLNMILGDVEET
VTTIEIDEETYEEIYKSTKRNIPMLFVRGDGDVLVALL
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgacatggaccagcaacaaactaccaacaccgtagaagagcccctggatctc
atcaggctcagcctggatgagcaaatttatgtgaaaatgagaaatgacagagagcttcga
ggcagattacatgcttatgatcagcatttaaatatgatattgggagatgtggaagaaact
gtgactactatagaaattgatgaggaaacatacgaagagatatataaatcaacaaaacgg
aatattccaatgctttttgtccggggagatggtgatgtactagttgccctcctttaa
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