KEGG   Zalophus californianus (California sea lion): 113913973
Entry
113913973         CDS       T07874                                 
Symbol
TRAF6
Name
(RefSeq) TNF receptor-associated factor 6
  KO
K03175  TNF receptor-associated factor 6 [EC:2.3.2.27]
Organism
zca  Zalophus californianus (California sea lion)
Pathway
zca04010  MAPK signaling pathway
zca04064  NF-kappa B signaling pathway
zca04120  Ubiquitin mediated proteolysis
zca04140  Autophagy - animal
zca04144  Endocytosis
zca04380  Osteoclast differentiation
zca04620  Toll-like receptor signaling pathway
zca04621  NOD-like receptor signaling pathway
zca04622  RIG-I-like receptor signaling pathway
zca04657  IL-17 signaling pathway
zca04722  Neurotrophin signaling pathway
zca04936  Alcoholic liver disease
zca05132  Salmonella infection
zca05133  Pertussis
zca05135  Yersinia infection
zca05140  Leishmaniasis
zca05142  Chagas disease
zca05145  Toxoplasmosis
zca05152  Tuberculosis
zca05160  Hepatitis C
zca05161  Hepatitis B
zca05162  Measles
zca05168  Herpes simplex virus 1 infection
zca05169  Epstein-Barr virus infection
zca05170  Human immunodeficiency virus 1 infection
zca05171  Coronavirus disease - COVID-19
zca05200  Pathways in cancer
zca05222  Small cell lung cancer
zca05235  PD-L1 expression and PD-1 checkpoint pathway in cancer
zca05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:zca00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    113913973 (TRAF6)
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    113913973 (TRAF6)
   04064 NF-kappa B signaling pathway
    113913973 (TRAF6)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    113913973 (TRAF6)
   04140 Autophagy - animal
    113913973 (TRAF6)
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    113913973 (TRAF6)
   04621 NOD-like receptor signaling pathway
    113913973 (TRAF6)
   04622 RIG-I-like receptor signaling pathway
    113913973 (TRAF6)
   04657 IL-17 signaling pathway
    113913973 (TRAF6)
  09156 Nervous system
   04722 Neurotrophin signaling pathway
    113913973 (TRAF6)
  09158 Development and regeneration
   04380 Osteoclast differentiation
    113913973 (TRAF6)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    113913973 (TRAF6)
   05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
    113913973 (TRAF6)
  09162 Cancer: specific types
   05222 Small cell lung cancer
    113913973 (TRAF6)
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    113913973 (TRAF6)
   05161 Hepatitis B
    113913973 (TRAF6)
   05160 Hepatitis C
    113913973 (TRAF6)
   05171 Coronavirus disease - COVID-19
    113913973 (TRAF6)
   05162 Measles
    113913973 (TRAF6)
   05168 Herpes simplex virus 1 infection
    113913973 (TRAF6)
   05169 Epstein-Barr virus infection
    113913973 (TRAF6)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    113913973 (TRAF6)
   05135 Yersinia infection
    113913973 (TRAF6)
   05133 Pertussis
    113913973 (TRAF6)
   05152 Tuberculosis
    113913973 (TRAF6)
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    113913973 (TRAF6)
   05140 Leishmaniasis
    113913973 (TRAF6)
   05142 Chagas disease
    113913973 (TRAF6)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    113913973 (TRAF6)
  09167 Endocrine and metabolic disease
   04936 Alcoholic liver disease
    113913973 (TRAF6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:zca04131]
    113913973 (TRAF6)
   04121 Ubiquitin system [BR:zca04121]
    113913973 (TRAF6)
Enzymes [BR:zca01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     113913973 (TRAF6)
Membrane trafficking [BR:zca04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Ubiquitin E3 ligases
    113913973 (TRAF6)
Ubiquitin system [BR:zca04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    113913973 (TRAF6)
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 zf-TRAF TRAF6_Z2 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-C3HC4_4 zf-TRAF_2 zf-RING_5 Sina_ZnF SlyX TRAF3_RING RING_XB3-XBAT31 DUF16 zf-RING_11 U-box DUF4455 PspA_IM30 DUF3450 Spc29 DUF7310 Med21 UPF0242 ATG16 Laminin_II CENP-F_leu_zip TMF_DNA_bd DUF1664
Other DBs
NCBI-GeneID: 113913973
NCBI-ProteinID: XP_027434355
UniProt: A0A6J2BQQ1
LinkDB
Position
11:complement(88499708..88520841)
AA seq 541 aa
MSLLNCENSCGSGQSEGDCCGAMAGLCSTAAKDDSVGGTAGPGNLSSSFMEEIQGYDVEF
DPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPD
NFAKREILSLMVKCPNEGCLHKMELRHLEDHQAHCEFALMNCPQCQRPFQKCLLNIHILK
ECPRRQVSCVNCAALMAFEDKEIHDQNCPLANVICEYCNTMLIREQMPNHYDLDCPTAPI
PCTFSTFGCHVKMQRNHLARHLQENTQSHMRMLAQAVQSLSLALAPVPQRDMPPYDSSSV
SRVSTPCHPEVHNFQETIQQLEGRLVRQDHQIRELTAKMETQSMYVNELKRTIRTLEDKV
AEIEAQQCNGIYIWKIGNFGMHLKSQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPTAQ
RCANYISLFVHTMQGEYDSHLPWPFQGTIRLAILDQSEAPVRQNHEEIMDAKPELLAFQR
PTIPRNPKGFGYVTFMHLEALRQRTFVKDDTLLVRCEVSTRFDMGSLRREGFQPRSTDSG
T
NT seq 1626 nt   +upstreamnt  +downstreamnt
atgagtctgctaaactgtgaaaacagctgtggatccggccagtctgagggtgactgctgt
ggcgctatggccggcctgtgtagcactgcagcaaaagatgacagtgtgggtggaaccgcc
ggcccggggaacctgtccagctcctttatggaagagatccagggatatgatgtggagttt
gacccacccctggaaagcaagtatgaatgccccatctgcttgatggcgttaagggaagca
gtgcaaacaccatgtggccacaggttctgcaaagcttgcatcatcaaatcaataagggat
gctggtcacaagtgtccagttgacaatgaaatattgctggaaaatcaactatttcctgac
aattttgcaaaacgagagattctttctttgatggtgaagtgtccaaatgaaggttgtttg
cacaagatggaactgaggcatcttgaggatcaccaagcgcattgtgagtttgctctcatg
aattgtccccagtgccagcgtcccttccaaaaatgcctacttaatattcacattcttaag
gagtgcccgaggagacaggtttcttgcgtgaactgtgctgcgttgatggcatttgaagat
aaagagatccatgaccagaactgtcctttggcaaatgtcatctgtgaatactgcaatact
atgctcatcagagaacagatgcctaatcactatgatctagactgtccaacagccccaatt
ccatgcacattcagtacttttggttgccatgtaaagatgcagaggaatcacttggcacgc
cacctacaagagaatacccagtcgcacatgagaatgttggctcaggccgttcagagttta
agccttgctttagctcctgtacctcagcgtgatatgccgccatatgattcttcctctgtg
tcccgggtctccactccgtgtcaccctgaggtccataatttccaagaaaccattcagcag
ttagagggtcgccttgtaagacaagaccatcaaatccgagagctaactgctaaaatggaa
actcagagcatgtatgtaaatgagctcaaacgaaccattcgaacccttgaagacaaagtt
gctgaaatagaagcgcagcagtgcaacgggatctacatctggaagattggcaactttggg
atgcatttgaaatctcaggaagaggagaaacctgttgtcattcacagccctggattctac
acgggcaaacctggctacaaactgtgcatgcgcctgcacctccagttaccaactgctcag
cgctgtgctaattatatatccctctttgtccacacaatgcagggagagtatgacagccac
ctgccttggcccttccagggtacaatacgccttgcaattcttgatcagtctgaagcgcct
gtaaggcaaaaccatgaagagatcatggatgccaaaccagagctgcttgccttccagaga
cccacaatcccacggaacccaaaaggttttggctatgtgacttttatgcacctggaagcc
ctaagacaaagaaccttcgttaaggatgatactttgttagtccgctgtgaggtctccacc
cgctttgacatgggcagtctccggagggagggttttcagccacgaagtactgattcaggg
acatag

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