KEGG   Zalophus californianus (California sea lion): 113919651
Entry
113919651         CDS       T07874                                 
Symbol
RB1
Name
(RefSeq) retinoblastoma-associated protein isoform X1
  KO
K06618  retinoblastoma-associated protein
Organism
zca  Zalophus californianus (California sea lion)
Pathway
zca01522  Endocrine resistance
zca04110  Cell cycle
zca04218  Cellular senescence
zca04934  Cushing syndrome
zca05160  Hepatitis C
zca05161  Hepatitis B
zca05163  Human cytomegalovirus infection
zca05165  Human papillomavirus infection
zca05166  Human T-cell leukemia virus 1 infection
zca05167  Kaposi sarcoma-associated herpesvirus infection
zca05169  Epstein-Barr virus infection
zca05200  Pathways in cancer
zca05203  Viral carcinogenesis
zca05207  Chemical carcinogenesis - receptor activation
zca05212  Pancreatic cancer
zca05214  Glioma
zca05215  Prostate cancer
zca05218  Melanoma
zca05219  Bladder cancer
zca05220  Chronic myeloid leukemia
zca05222  Small cell lung cancer
zca05223  Non-small cell lung cancer
zca05224  Breast cancer
zca05225  Hepatocellular carcinoma
zca05226  Gastric cancer
Brite
KEGG Orthology (KO) [BR:zca00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    113919651 (RB1)
   04218 Cellular senescence
    113919651 (RB1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    113919651 (RB1)
   05207 Chemical carcinogenesis - receptor activation
    113919651 (RB1)
   05203 Viral carcinogenesis
    113919651 (RB1)
  09162 Cancer: specific types
   05212 Pancreatic cancer
    113919651 (RB1)
   05225 Hepatocellular carcinoma
    113919651 (RB1)
   05226 Gastric cancer
    113919651 (RB1)
   05214 Glioma
    113919651 (RB1)
   05220 Chronic myeloid leukemia
    113919651 (RB1)
   05218 Melanoma
    113919651 (RB1)
   05219 Bladder cancer
    113919651 (RB1)
   05215 Prostate cancer
    113919651 (RB1)
   05224 Breast cancer
    113919651 (RB1)
   05222 Small cell lung cancer
    113919651 (RB1)
   05223 Non-small cell lung cancer
    113919651 (RB1)
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    113919651 (RB1)
   05161 Hepatitis B
    113919651 (RB1)
   05160 Hepatitis C
    113919651 (RB1)
   05163 Human cytomegalovirus infection
    113919651 (RB1)
   05167 Kaposi sarcoma-associated herpesvirus infection
    113919651 (RB1)
   05169 Epstein-Barr virus infection
    113919651 (RB1)
   05165 Human papillomavirus infection
    113919651 (RB1)
  09167 Endocrine and metabolic disease
   04934 Cushing syndrome
    113919651 (RB1)
  09176 Drug resistance: antineoplastic
   01522 Endocrine resistance
    113919651 (RB1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:zca01009]
    113919651 (RB1)
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:zca03000]
    113919651 (RB1)
Protein phosphatases and associated proteins [BR:zca01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     113919651 (RB1)
Transcription factors [BR:zca03000]
 Eukaryotic type
  Other transcription factors
   Pocket domain Rb
    113919651 (RB1)
SSDB
Motif
Pfam: Rb_C RB_A RB_B DUF3452 TFIIB
Other DBs
NCBI-GeneID: 113919651
NCBI-ProteinID: XP_027444925
UniProt: A0A6J2CKT0
LinkDB
Position
3:58173377..58333884
AA seq 931 aa
MPPKTPRRAAAAAAAAAAAAAAEPPPPPPPPPEEDPEQDSGPEDLPLPRLVFEETEEPDF
TALCQKLKIPDHVRERAWLTWEKVSSVDGVLEGYVQRKKELWGICIFIAAVDLDEMPFTF
TELQKNIETSVCKFFDLLKEIDTSTKVDNAMSRLLKKYNVLCALYSKLERTCELIYLTQP
SSLISTEINSVLVLKVSWITFLLAKGEVLQMEDDLVISFQLMLCVLDYFIKLSPPALLKE
PYKTAVIPFNGSPRTPRRGQNRSARIAKQLENDTRIIEVLCKEHECNIDEVKNVYFKNFI
PFMNSLGIVASNGLPEVESLSKQYEEIYLKNKDLDARLFLDHDKTLQADPVDSFEMQRTP
RKSNTDEEVNVILPQTPVRTVMNTIQQLMMILNSASDQPSENLISYFNNCTVNPKESILK
RVKDVGYIFKEKFAKAVGQGCMEIGSQRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLL
NDNIFHMSLLACALEVVMATYSRSTSQNLDTGTDLSFPWILNVLNLKAFDFYKVIESFIK
AEANLTREMIKHLERCEHRIMESLAWLSDSPLFDLIKQAKDREGPADHLESACALNLPLQ
SNHTAADMYLSPVRSPKKKGSTIRVNSTANTEAQASSAFQTQKPLKSTSLSLFYKKVYRL
AYLRLNTLCARLLSDHPELEHIIWTLFQHTLQNEYELMKDRHLDQIMMCSMYGICKVKNI
DLKFKIIVTAYKDLPHAVQETFKRVLIREEEYDSIIVFYNSVFMQRLKTNILQYASTRPP
TLSPIPHIPRSPYKFSSSPLRIPGGNIYISPLKNPYKISEGVPTPTKMTPRSRILVSIGE
SFGTSEKFQKINQMVGNSDRVLKRSAEGSNPPKPLKKLRFDIEGSDEANGSKHLPGESKF
QQKLAEMTSTRTRMQKQKMNDSMDTSNREEK
NT seq 2796 nt   +upstreamnt  +downstreamnt
atgccgcccaaaaccccccggagagcagccgccgccgccgccgccgccgccgccgccgcc
gccgccgaacccccgccgccgccgccgccccctcccgaggaggaccccgagcaggacagt
ggccccgaggacctgcctctgcccaggcttgtgtttgaagaaaccgaagaacctgatttt
actgcattatgtcagaaattaaagataccagatcatgtcagagaaagagcttggttaact
tgggagaaagtttcgtctgtggatggagtattggaaggttatgttcaaaggaaaaaggag
ctatggggaatctgtatctttattgcagcagttgacctagatgagatgccattcactttt
actgagctacagaaaaacatagaaaccagtgtctgcaaattctttgatttactaaaagaa
attgataccagtaccaaagttgataatgctatgtcaagactgttaaagaagtataatgta
ttgtgtgcactctacagcaaattagaaaggacatgtgaacttatatatttgacacaaccc
agcagtttgatatctactgaaataaactctgtgttggtgctaaaagtttcttggatcaca
tttttactagctaaaggggaagtgttacaaatggaggatgatctcgtcatctcatttcag
ttaatgctctgtgtccttgactattttattaaactctcacctcctgcattgcttaaagaa
ccatataaaacagctgtaataccttttaatggttcacctcgaacaccaaggcgaggtcag
aacaggagtgcacggatagcaaaacaactagaaaatgatacaagaattattgaagttctc
tgtaaagaacatgaatgtaatatagatgaggtgaaaaatgtttatttcaaaaatttcata
ccttttatgaattctcttggaattgtagcttctaatggacttccagaggtggaaagtctc
tctaaacaatatgaagagatttaccttaaaaacaaagatcttgatgcaagattatttcta
gatcatgataaaactcttcaggctgatcctgtagacagttttgaaatgcagagaacacca
cgaaaaagtaacactgatgaagaggtgaatgtgattcttccacagactccagttcggact
gttatgaatactatccaacaattaatgatgatcttaaattcagcaagtgatcaaccatca
gaaaatctgatttcctattttaataactgcacagtgaatccaaaggaaagtatcctgaaa
agagtgaaggatgttggatacatctttaaagagaaatttgctaaagctgtgggacaggga
tgtatggaaattggatcacagcgatacaaacttggagtccgattgtattatcgagtaatg
gaatccatgcttaaatcagaagaagaacgattatccattcaaaattttagcaaactcctg
aatgacaacatctttcatatgtctttattggcatgcgctcttgaggttgtaatggctaca
tatagcagaagtacatctcagaatcttgatactggaacagatttgtccttcccatggatt
ctgaatgtacttaatttaaaagcctttgatttttacaaagtgattgaaagttttatcaaa
gcagaagccaacttgaccagagaaatgataaaacatttagaacgatgtgaacatcgaatc
atggaatcacttgcatggctctctgattcacctttatttgatctgattaaacaagcaaaa
gaccgagaaggaccagctgatcaccttgaatctgcttgtgctctcaaccttcctctccag
agtaatcacactgcagcggatatgtatctctctcctgtaagatccccaaagaaaaaagga
tcaactatacgtgtaaattctactgcaaacacagaggcacaagcaagctcagccttccag
actcagaagccattgaaatctacctccctttcacttttttacaagaaagtgtaccgacta
gcatatcttcgactaaataccctgtgtgcacgccttctgtctgaccacccagaactagaa
cacatcatctggaccctttttcagcacacactgcaaaatgagtatgaactcatgaaagac
aggcatttggatcagattatgatgtgttccatgtatggtatatgcaaagtgaagaatata
gaccttaaattcaaaatcattgtaacggcatacaaggatcttcctcatgctgttcaggag
acattcaaacgtgttttgatcagagaagaggagtatgattccattatagtgttctataac
tcggtcttcatgcagagactgaaaacaaatattttgcagtatgcttctaccaggccccct
accttgtcaccaatacctcacattcctcgaagcccttacaagttttctagttcaccttta
cggattcctggggggaacatctatatatcacccctgaagaatccatataaaatttcagaa
ggggtgccaacgccaacaaaaatgactccaagatcaagaatcttagtatccattggtgaa
tcatttgggacttctgagaagttccagaaaataaatcagatggtgggtaacagcgaccgt
gtgctcaaaagaagtgctgaaggcagcaaccctcctaaaccattgaaaaaactacgcttt
gatattgaaggatcagatgaagcaaatggaagtaaacatctcccaggggaatccaaattt
caacagaaactggcagaaatgacatctacccgaacacgaatgcagaagcagaaaatgaac
gatagcatggatacctcaaacagggaagaaaaatga

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