Zalophus californianus (California sea lion): 113919772
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Entry
113919772 CDS
T07874
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca03018
RNA degradation
zca03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113919772
09123 Folding, sorting and degradation
03018 RNA degradation
113919772
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zca03019
]
113919772
03041 Spliceosome [BR:
zca03041
]
113919772
Messenger RNA biogenesis [BR:
zca03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113919772
mRNA degradation factors
5'-3' decay
Lsm complex
113919772
Spliceosome [BR:
zca03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
113919772
Complex C
U2 snRNP components
113919772
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
TIG_SUH
vATP-synt_E
DUF150_C
Motif
Other DBs
NCBI-GeneID:
113919772
NCBI-ProteinID:
XP_027445250
UniProt:
A0A6J2CLP1
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All DBs
Position
3:complement(162695053..162695596)
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AA seq
102 aa
AA seq
DB search
MADDVDQQQTTNTVEEPLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEET
VTTIEIDEETYEEIYKSTKRNIPMLFVRGDGVVLVAPPLRVG
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgacgtagaccagcaacaaactaccaacactgtggaagagcccctggatctc
atcaggctcagcctggatgagcgaatttatgtgaaaatgagaaatgacagagagcttcga
ggcagattacatgcttatgatcagcatttaaatatgatattgggagatgtggaagaaact
gtgactactatagaaattgatgaggaaacatacgaagagatatataaatcaacaaaacgg
aatattccaatgctttttgtccggggagatggtgttgtactagttgcccctcctttaaga
gttggctga
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