Zalophus californianus (California sea lion): 113921409
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Entry
113921409 CDS
T07874
Symbol
APAF1
Name
(RefSeq) apoptotic protease-activating factor 1
KO
K02084
apoptotic protease-activating factor
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca01524
Platinum drug resistance
zca04115
p53 signaling pathway
zca04210
Apoptosis
zca04215
Apoptosis - multiple species
zca05010
Alzheimer disease
zca05012
Parkinson disease
zca05014
Amyotrophic lateral sclerosis
zca05016
Huntington disease
zca05020
Prion disease
zca05022
Pathways of neurodegeneration - multiple diseases
zca05134
Legionellosis
zca05152
Tuberculosis
zca05160
Hepatitis C
zca05161
Hepatitis B
zca05162
Measles
zca05164
Influenza A
zca05168
Herpes simplex virus 1 infection
zca05169
Epstein-Barr virus infection
zca05200
Pathways in cancer
zca05222
Small cell lung cancer
zca05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
113921409 (APAF1)
04215 Apoptosis - multiple species
113921409 (APAF1)
04115 p53 signaling pathway
113921409 (APAF1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
113921409 (APAF1)
09162 Cancer: specific types
05222 Small cell lung cancer
113921409 (APAF1)
09172 Infectious disease: viral
05161 Hepatitis B
113921409 (APAF1)
05160 Hepatitis C
113921409 (APAF1)
05164 Influenza A
113921409 (APAF1)
05162 Measles
113921409 (APAF1)
05168 Herpes simplex virus 1 infection
113921409 (APAF1)
05169 Epstein-Barr virus infection
113921409 (APAF1)
09171 Infectious disease: bacterial
05134 Legionellosis
113921409 (APAF1)
05152 Tuberculosis
113921409 (APAF1)
09164 Neurodegenerative disease
05010 Alzheimer disease
113921409 (APAF1)
05012 Parkinson disease
113921409 (APAF1)
05014 Amyotrophic lateral sclerosis
113921409 (APAF1)
05016 Huntington disease
113921409 (APAF1)
05020 Prion disease
113921409 (APAF1)
05022 Pathways of neurodegeneration - multiple diseases
113921409 (APAF1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
113921409 (APAF1)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
113921409 (APAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
WD40_Prp19
WD40_WDHD1_1st
APAF1_C
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR36-Utp21_2nd
NB-ARC
WD40_Gbeta
Beta-prop_CAF1B_HIR1
WHD_APAF1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
CARD
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR41
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
Beta-prop_Aladin
WD40_MABP1-WDR62_1st
RMC1_N
Beta-prop_IFT140_1st
Beta-prop_NUP159_NUP214
Beta-prop_WDR35_TULP_N
WD40_RFWD3
WD40_like
Beta-prop_HPS5
Beta-prop_VPS8
Ge1_WD40
Beta-prop_WDR11_2nd
Beta-prop_DCAF12
CARD_2
Beta-prop_DCAF4
PEP5_VPS11_N
Utp8_b_propeller
AAA_16
Beta-prop_IFT140_2nd
Beta-prop_Nup120_160
Beta-prop_ACSF4
Beta-prop_RSE1_2nd
ATPase_2
Hira
AAA_22
AAA_18
NPHP3_N
DUF2677
nSTAND6
NACHT
Motif
Other DBs
NCBI-GeneID:
113921409
NCBI-ProteinID:
XP_027447773
UniProt:
A0A6J2CU39
LinkDB
All DBs
Position
9:complement(22740329..22830735)
Genome browser
AA seq
1250 aa
AA seq
DB search
MDPKARNCLLQHREALEKDIKTSYIMDRMINDGVLTVLEEEKVKNEPTQQQRAALLIKMI
LKKDNYSYISFYNALIHEGYKDLAALLHSGIPVISSSNGGKDSVGGITSYVKTVLCEGGV
PQRPVVFVTRKKLVNAIRQNLSTLNGEPGWVVIYGMAGCGKSVLAAEAVRDHFFLDGCFP
GGVHWVSVGKQDKSGLLMKLQNLCTRLDQDESFSQRLPLNIEEAKDRLRILMLRKHPRSL
LILDDVWDPWVLKAFDNQCQILLTTRDKSVTDSVMGPKYVVSVESGLGKEKGLEILSLFV
NMKKADLPEQAHSIIKECKGSPLVVSLIGALLRDFPTRWDYYLRQLQNKQFKRIRKSSSY
DYEALDEAMSISVEMLREDIKDYYTDLSILQKDVKVPTKVLCLLWDMETEEVEDILQEFV
NKSLLFCDRNGKSFCYYLHDLQVDFLIEKNRGQLQDLHKKIITQFQKHYQPHTLSPDQED
CMYWYNFLAYHMASANMHKELCALMFSLDWIKAKTELIGPAHLIHEFVEYRHILDEKDCA
VCENFQEFLSLNGHLLGRHPFPNIVQLGLCEPETSEVYQQAKLQAKQEVDHGVLYLEWIN
KKNIKNLSRLVVRPHTDAVYHACFSEDGQRIASCGVDKTLQVFKAETGEKLLEIKAHEDE
VLCCAFSTDDRLIATCSVDKKVKIWNSLTGELVHIYDEHSEQVNCCHFTNNSHYLLLATA
SSDCFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDVKSANERK
SINVKQFFLNSEEPQEDMEVIVKCCSWSADGARLMVAAKNKIFLFDIHTSGLLAEIPTGH
HSTIQYCDFSPQNHLAVVALSQCCVELWNMDSYLKVADCRGHLSWVHSVMFSPDGSSFLT
SSDDQTIRLWETKKVCKNSAIVLKQEIDVVFQENEVTVLAVDNIKRLQLVNGKTGQIDYL
TEAQVSCCCLSPHLQYIAFGGEDGAIEILELLNNRIFQSRIGHKKTVRHIQFTDDGKTLI
SSSDDSSIQVWNWQSEEYVFLQAHQETVKDFKLLKNSKLLSWSFDGTVKVWSIITGRIEK
DFVCHQDTVLSCDISPDATKFSSTSADKTAKIWSFDLLSPLCELRGHKGCVRCSVFSVDS
TLLATGDDNGEIRIWNVSNGELLHLCAPISVEEGAATHGGWVTDLCFSPDSKMLVSAGGY
LKWWNVVTGESSQTFYTNGTYLKKIHVSPDFKTYVTVDNLGILYILQMLE
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atggacccaaaagctcgaaactgtttgcttcaacatagagaagccctggaaaaggacatc
aaaacgtcctacatcatggatcgtatgattaatgatggagttttaacagtactggaggag
gaaaaagtaaaaaatgagcccactcaacagcagcgagcagctctgttaattaaaatgata
cttaaaaaagataattattcctacatatcattctacaatgctttaatacatgaagggtat
aaagatcttgctgcccttctccatagtggcattcctgtcatctcttcttccaatggtggc
aaagattcagttggtggaataacttcatatgtaaagacagtcctgtgcgaaggtggagtg
ccacagaggccggttgtttttgttaccaggaagaagctggtgaatgcaattcggcagaac
ctatccacactaaatggtgaaccaggatgggtcgtcatatatggaatggcaggttgtggg
aagtctgttttagctgcagaagctgttcgagatcattttttcttagatggttgtttccca
gggggtgtgcactgggtttcagttgggaaacaagacaaatctggacttctgatgaaattg
cagaatctttgcacacggttggatcaagatgagagtttctctcagaggcttccactcaat
attgaagaggctaaagaccgtcttcgcattctgatgctgcgcaaacacccaaggtctctg
ttgatcttggatgatgtttgggatccttgggtattaaaagcttttgacaatcagtgtcaa
attctccttacaaccagagacaagagtgttacagattcagtaatgggtcctaaatacgta
gtctctgtggagagtggcttaggaaaagaaaaaggacttgaaattttatccctttttgtt
aatatgaagaaagcagatttgccagagcaagctcacagtattataaaagaatgtaaaggt
tctcctcttgtagtgtctttaattggcgcacttttacgtgattttcccacccgttgggat
tactacctcaggcaacttcagaataagcaatttaagagaataaggaaatcttcatcttat
gattatgaggctctggatgaagccatgtctataagtgttgaaatgctcagagaggacatc
aaagattattacacagatctttctatccttcagaaggatgttaaggtgcctacaaaggtg
ttatgtcttctctgggacatggaaactgaagaagttgaagacatactgcaggagtttgtt
aataagtctctcttattctgtgatcggaatggaaaatcattttgttattatttacatgat
cttcaagtagatttccttatagagaagaatcgcggccaacttcaggatttacataagaag
ataatcactcagttccagaaacattaccagccacatactctttcaccagatcaggaggac
tgcatgtattggtacaattttctggcgtaccacatggctagtgccaatatgcacaaagaa
ctttgtgctttaatgttttctctggattggattaaagcaaaaactgaactcataggccct
gctcatctgattcatgaatttgtggaatacaggcatatattggatgaaaaggattgtgca
gtctgtgaaaatttccaggaatttttatctttaaatggacatcttcttggacgacatcca
tttcctaatattgtacagctgggtctctgtgaaccagaaacctcagaagtttatcagcaa
gctaagctgcaggccaagcaggaggtcgatcatggagttctttacctggagtggataaac
aaaaaaaacatcaagaatctttcccgcttagttgtccgcccccatacagatgctgtttac
catgcttgcttttctgaggatggtcaaagaatagcttcttgtggagttgataaaacccta
caggtgttcaaagctgaaacaggagagaaactgctggaaatcaaggctcatgaggatgaa
gtgctttgttgtgcattctctacagatgacagattaatagcaacctgctcagtggataaa
aaagtgaagatttggaattctctgacgggggaactagtacatatctatgatgagcactca
gagcaagtcaactgctgccactttaccaacaacagtcattaccttctcttagccactgcg
tcaagtgactgcttcctcaaactctgggatttgaatcaaaaagaatgtcgcaataccatg
tttggccacacaaattcagtcaatcactgcagattttcaccagatgataagcttttggct
agttgttcagctgatggaacattaaagctttgggatgtgaaatcagcaaacgagaggaaa
agcattaatgtgaagcagttcttcttaaattcagaggagcctcaagaggatatggaagtg
atagtgaaatgctgttcatggtctgctgatggtgctaggctaatggtggcagcaaaaaat
aaaatctttctttttgacattcataccagtggcttattggcagaaatccctacaggccat
cacagcaccatccagtattgtgacttctccccgcaaaatcatttggcagtggtggctttg
tcccagtgctgtgtggagttgtggaatatggactcgtatttaaaagtggctgattgcaga
ggacatctaagttgggttcattctgtgatgttttctcctgatggatcatcatttttgaca
tcttctgatgaccagacaatcaggctctgggagacaaaaaaagtatgtaagaattctgct
attgtgttaaagcaagaaatagatgttgtgtttcaagaaaatgaagtgacggttcttgca
gttgacaatataaaacgtctgcagctcgttaatggaaaaacaggtcagattgattatctg
actgaagctcaagttagttgctgttgcctaagtccacatcttcagtacattgcatttgga
ggtgaagatggagccattgagattttagagctcctaaacaacagaatcttccaatccagg
attggacacaagaaaactgtgcggcacatccagttcacagatgatgggaagactcttatt
tcaagctctgatgattcttcaattcaggtatggaattggcaatcagaagaatatgtcttt
ctacaagcccaccaggaaacagtgaaagactttaagctcttgaaaaattcaaaactgctt
tcctggtcatttgatggaacagtgaaggtatggagtattattactggaagaatagaaaaa
gactttgtctgtcaccaggatacggtactttcttgtgatatttctcctgatgctaccaag
ttttcatctacatctgctgataagactgcaaagatttggagttttgaccttctttcccct
ctttgtgaattgaggggccacaaaggttgtgtgcgctgctctgtcttctctgtggacagt
accctgttggcgactggagatgacaatggagaaatccggatatggaatgtctcaaatggt
gagctgcttcatttgtgtgctccgatttcagtagaagaaggagctgctacccacggaggc
tgggtgactgacctttgcttttctccagatagcaaaatgcttgtctctgctggaggatat
cttaagtggtggaatgttgtcactggggaatcctcacagaccttctacacaaatggaacc
tatcttaagaaaatacatgtgtcccctgacttcaaaacatatgtgactgttgataatctt
ggtattttatatattttacagatgttagaataa
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integrated database retrieval system
