Zalophus californianus (California sea lion): 113922007
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Entry
113922007 CDS
T07874
Symbol
CD4
Name
(RefSeq) T-cell surface glycoprotein CD4 isoform X1
KO
K06454
T-cell surface glycoprotein CD4
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca03250
Viral life cycle - HIV-1
zca03260
Virion - Human immunodeficiency virus
zca04060
Cytokine-cytokine receptor interaction
zca04514
Cell adhesion molecules
zca04612
Antigen processing and presentation
zca04640
Hematopoietic cell lineage
zca04658
Th1 and Th2 cell differentiation
zca04659
Th17 cell differentiation
zca04660
T cell receptor signaling pathway
zca05135
Yersinia infection
zca05166
Human T-cell leukemia virus 1 infection
zca05170
Human immunodeficiency virus 1 infection
zca05235
PD-L1 expression and PD-1 checkpoint pathway in cancer
zca05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
113922007 (CD4)
03260 Virion - Human immunodeficiency virus
113922007 (CD4)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
113922007 (CD4)
04514 Cell adhesion molecules
113922007 (CD4)
09150 Organismal Systems
09151 Immune system
04640 Hematopoietic cell lineage
113922007 (CD4)
04612 Antigen processing and presentation
113922007 (CD4)
04660 T cell receptor signaling pathway
113922007 (CD4)
04658 Th1 and Th2 cell differentiation
113922007 (CD4)
04659 Th17 cell differentiation
113922007 (CD4)
09160 Human Diseases
09161 Cancer: overview
05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
113922007 (CD4)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
113922007 (CD4)
05170 Human immunodeficiency virus 1 infection
113922007 (CD4)
09171 Infectious disease: bacterial
05135 Yersinia infection
113922007 (CD4)
09163 Immune disease
05340 Primary immunodeficiency
113922007 (CD4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
zca04090
]
113922007 (CD4)
CD molecules [BR:
zca04090
]
Proteins
113922007 (CD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CD4-extracel
C2-set
Ig_3
ig
V-set
Ig_2
I-set
Ig_5
Pilin
GBD_Hemicentin
Receptor_2B4
Motif
Other DBs
NCBI-GeneID:
113922007
NCBI-ProteinID:
XP_027449456
UniProt:
A0A6J2D170
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Position
9:complement(98124420..98169546)
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AA seq
402 aa
AA seq
DB search
MSRGAAFRHLLLVLQLAMLPAVPLEREVVLAKVGDTAELPCHATPGKNIGFNWKHSSMLK
ILGRQGSFWLTGASKLKHRVESKKNLWDQGSFPLIIKDLEAADSGVYFCEVEGKKQEVEL
LVFNLTAKWDTGSGGSSNIRLLQGQQLTLTVEGPSGSSPSVQWKGPGNKSKSSGQSLSLS
GVEPQESGTWTCTISQNQKTVVFNINILVLAFQKVSNTVYTKEGEQVEFSFPLNFKDENL
SGELRWRAEGTPSSRLWISFILENGKLSLKDSHHTRLQMKSFPPLSFILPQALSQYAGSG
NLTLSLAKGTLQREVNLVVMRVTKSQNNVTCEVLGPTSPELTLSLNLEERAAKVSKKQKL
VSVVDPERGTWQCLLSDKDKVLLASKVEAPGRADVSDQETPQ
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgaggggctgcttttaggcacctgctcctggtgctgcagttggcgatgctcccc
gcagtccctctggaaagagaggtggtgttggcgaaggtgggagacacagcagaactgccc
tgccatgctaccccagggaagaacataggcttcaactggaaacattcttccatgctcaag
attctggggcgtcagggctccttctggcttacaggtgcctccaagctgaagcatcgcgtc
gaatcgaaaaaaaacctgtgggaccaaggatcctttcctctgatcatcaaggatcttgaa
gcagcagactcaggggtttacttctgtgaggtagagggcaagaagcaagaggtggagttg
ctggtgttcaacttgactgccaagtgggacaccggcagtggcggcagcagcaacatccgc
ctgctgcaagggcagcagctgaccctgaccgtggagggcccctctggtagtagcccttcc
gtgcaatggaaaggtccagggaataaaagcaagagcagtggccaaagcctctcactgtct
ggggtggagccgcaggagagcggtacctggacatgcaccatctcccagaaccagaagaca
gtggtgttcaacataaacatcttggtgctggctttccagaaggtctctaacacagtctat
acaaaagaaggggagcaggtggagttctccttcccgcttaacttcaaagatgaaaacctg
agcggggagctgaggtggcgggcagaggggactccctcttcccggctctggatctccttc
atcttggagaatgggaagctatctttgaaagattctcaccacaccagactccagatgaag
agttttcccccgctcagctttatcctgccccaggctttgtctcagtatgctggttctgga
aacctgaccctgagtcttgccaagggaacattgcagcgggaagtgaatctcgtggtgatg
agagtgactaagtctcagaacaatgtgacctgcgaggtgctaggacccacctcccctgag
ctgactctgagcttgaatctggaagagcgggctgccaaagtctcgaagaagcagaagctg
gtatcggtggtggaccctgagaggggaacatggcagtgtctactgagtgacaaggacaaa
gtcctgctggcctccaaggtcgaggcgccaggcagagcggatgtctcagatcaagagact
cctcagtga
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