Zalophus californianus (California sea lion): 113934687
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Entry
113934687 CDS
T07874
Symbol
IARS1
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic isoform X1
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
113934687 (IARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
zca01007
]
113934687 (IARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zca03016
]
113934687 (IARS1)
Enzymes [BR:
zca01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
113934687 (IARS1)
Amino acid related enzymes [BR:
zca01007
]
Aminoacyl-tRNA synthetase
Class I (U)
113934687 (IARS1)
Transfer RNA biogenesis [BR:
zca03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
113934687 (IARS1)
Prokaryotic type
Other AARSs
113934687 (IARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Ubiquitin_IARS1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
113934687
NCBI-ProteinID:
XP_027471941
UniProt:
A0A6J2EUQ4
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All DBs
Position
13:95106597..95166324
Genome browser
AA seq
1262 aa
AA seq
DB search
MVQQVPENINFPAEEEKILQFWSEFNCFQECLKQSKHKPRFTFYDGPPFATGLPHYGHIL
AGTIKDIVTRYAHQSGFHVDRRFGWDCHGLPVEYEVDKALGVRGPEDVARMGVEGYNSQC
RAVVMRYSTEWKSTVTRLGRWIDFDNDYKTLYPQFMESVWWVFKQLYDKGLVYRGVKVMP
FSTACNTPLSNFESHQNYKDVQDPSVFVTFPLEEDENVSLVAWTTTPWTLPSNLALCVNP
DMQYVKIKDVVRGKLLILMEARLPALYKLESDYEILERFPGTCLKGKKYRPLFDYFVQLK
EDGAFTVLADGYVREDEGTGVVHQAPYFGADDYRVCMDFNIIQKDSSPVCPVDASGCFTA
EVTDFMGQYVKDADKNIIRTLKEKGRLLVSSTFTHSYPFCWRSDTPLIYKAVPSWFVRVE
HMVDQLLKNNDLCYWVPEFVREKRFGNWLKDARDWAVSRNRYWGTPIPLWVSDDFEEVVC
IGSMAELEELSGAKISDLHRESIDHLTIPSRCGKGVLRRISEVFDCWFESGSMPYAQVHY
PFENKREFDDAFPADFIAEGIDQTRGWFYTLLVLATALFGQPPFRNVIVNGLVLASDGQK
MSKRKKNYPDPLSIIHKYGADALRLYLINSPVVRAENLRFKEEGVRDVLKDVLLPWYNAY
RFFTQSVLRLQKEEDMEFLYNESTVKESANITDRWVLSCMQSLVGFFETEMAAYRLYTVV
PRLVKFVDVLTNWYVRMNRRRLKGENGVEDCVMALETLFSVLLSLCRLMAPYTPFLTELM
YQNLKLLIDPVSVQDKDTHSIHYLMLPHVREELIDKNTESAVSRMQSVIELGRVIRDRKT
IPIKYPLKEIVVIHQDPEALHEIKSLEKYIIEELNVRKVTLSTDKNKYGIRLRAEPDHMV
LGKRLKGAFRAVMTSIKQLSSEELERFQDSGTIVVEGHELHEEDIRLMYTFDQMTGGTTQ
YEAHSDAQVLVLLDVTPDQSMVDEGVAREVINRIQKLRKKCNLVPTDEITVYYKAKSEGK
YLNNVIESHTEFIFATIKAPLKPYPVPMSDKVLIQEETQLKGSDLEITITRGSSLTGPAC
AYVNLNICINGSEQGGVLLLENPKGDNRLDLLKLKSVITSIFGVKNTELAVLHGATEIRN
QTDLLSLSGKTLRVGAGSAPAVLDGPSTALCRYINLQLLNAGPQECVKGTVGTLLLENPP
GQNGLTHQGLLYEAAKVFGLRSRKLKLFLNETQTHEITEEIPMKTLNMKTVYVSVLPTTA
DF
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atggttcagcaagttccagaaaacatcaattttcctgctgaagaagagaaaatcttgcag
ttctggtctgaatttaactgttttcaggaatgcttaaagcaatcaaaacataagccaaga
tttacgttctatgacgggcctccttttgcaactggactgcctcactatggacacatcctt
gcagggacaattaaagatatagttaccagatatgctcaccagagtgggtttcatgttgac
agaagatttggatgggattgtcatggcttacctgtggaatacgaagttgataaggcgctg
ggagtcagaggaccagaggatgtggcccgcatgggggttgagggctacaacagtcagtgc
cgggccgtcgtgatgaggtactccacggagtggaagtccactgttaccagacttggccga
tggattgactttgacaatgactacaaaactctgtatccacaattcatggaatctgtctgg
tgggtcttcaagcagctctatgataaaggccttgtgtatagaggcgtgaaagtcatgcct
ttctccaccgcatgcaacactccactttccaactttgaatctcaccagaactacaaggat
gttcaagacccttcagtgtttgtaactttccccttggaggaagatgaaaatgtgtctttg
gtggcttggacgaccactccctggacattacctagtaaccttgccctgtgtgttaatcca
gacatgcagtatgtgaagattaaagatgttgtcagaggaaaattactcattttaatggaa
gccagattaccagccctctataagttggagagtgactatgagatccttgaaagatttccc
ggtacctgtctcaaaggcaagaagtacaggcccctgtttgactattttgtgcagctcaag
gaggacggtgctttcacagtgctcgccgatggctacgtgcgggaggacgagggcacggga
gtggtgcaccaggctccgtacttcggcgcggacgactatcgggtctgtatggacttcaac
atcattcagaaagactcttctcctgtttgccctgtggatgcttcaggctgtttcacggca
gaagtgacagatttcatgggacagtatgtgaaggatgctgacaaaaacatcatcaggacc
ctgaaggaaaaaggccgacttcttgtctccagcaccttcactcacagttaccccttctgc
tggaggtcagacactcccctgatttacaaagccgtgcccagctggttcgtgcgggtggag
cacatggtggaccagctcttgaagaacaacgacctgtgctactgggtcccagagtttgtg
cgagagaagcgatttggaaattggctgaaagatgcacgtgactgggcagtttccagaaac
agatactggggcaccccgatccccctgtgggtcagcgatgacttcgaggaggtagtatgc
attggatcgatggcagaacttgaagaactgtcgggagcaaagatctctgatctccacaga
gagagcattgaccatctgaccatcccttcccgctgtgggaagggagtgttgcgtcgcatc
tctgaagtgtttgactgttggttcgagagcggcagcatgccctatgctcaagttcattat
ccgtttgaaaacaagagggagtttgatgatgcatttcctgcagacttcattgccgaaggc
attgaccagaccagaggatggttttacaccctgctggtgctggccaccgctctctttgga
cagccgcctttcaggaacgtgattgtgaacgggctcgtcctggcaagtgatggtcaaaaa
atgagcaaacgaaaaaagaattatccggatccactttcaatcatccataagtacggtgct
gacgccctcagattgtatctgatcaactcccctgtggtgagggcagaaaatctccgattt
aaggaggagggtgtgcgtgacgtcttgaaggacgtgctgctcccttggtacaatgcctac
cgcttcttcacccagagcgtcctgaggctgcagaaggaggaagatatggaattcctgtac
aacgagagcacagttaaagaaagtgccaacatcacagaccggtgggtcctgtcctgcatg
cagtcgctggttgggttctttgagacagaaatggcagcttacaggctctatacggtggtg
cctcgcctggtcaagtttgtggatgtcctaaccaactggtatgtcaggatgaaccgcaga
aggctgaagggtgaaaatggggtggaagactgcgttatggccctggagaccttgttcagt
gtcctgctgtctctgtgcagactgatggccccctatacaccttttctcaccgaattgatg
taccagaatctaaagctgctgatcgaccccgtttctgtccaggacaaggacacacacagc
atccactacctcatgctgccccatgttcgggaggagctgattgacaagaacacggagagc
gcagtatctcggatgcagtctgtgattgaacttgggcgagtgattcgagaccgcaaaacc
attccgataaagtatcctttgaaggaaattgtggttatccatcaggatccagaagctctt
catgagatcaagtctttggagaagtatatcattgaggaattgaacgtccgaaaggttacg
ctgtctacagataaaaacaagtatggcattcgcctaagggcagagcctgatcacatggtc
ctggggaagcgcctgaagggagccttcagggcggtgatgacgtccatcaagcagctgagc
agtgaggagctggagcgcttccaggacagtgggaccattgtcgtagaaggccatgagctg
catgaagaggacatccgcctcatgtacacctttgatcagatgacaggagggacgacacag
tatgaagcgcactcggacgcccaggttttggttctcttagatgtcacccccgaccagtca
atggtggatgaaggagtggctcgggaggtcatcaatcgcatccagaaacttcgcaaaaag
tgcaatctggttccaactgatgaaataacagtttattataaagcaaagtctgaagggaag
tatctgaataatgttatcgaaagccacacagagttcatatttgccactataaaggctccc
ttgaaaccgtatccagttccaatgtcagataaagtccttattcaagaagaaacgcagtta
aaaggttctgacctggaaattacaatcaccagaggatcatccctgactggtcctgcttgt
gcatatgtcaatcttaacatttgtataaatggcagcgagcaaggtggagtattgcttctg
gaaaatccaaaaggcgataacaggttggaccttttaaagctgaaaagtgttattactagt
atttttggtgtgaaaaataccgagctggctgtcctccatggtgccacagaaatacgaaac
cagactgacttactgagtcttagtgggaaaacacttcgagtgggagcgggttctgccccc
gctgtgttggacggccccagcactgcgctctgccgctacatcaacctgcagctcctgaac
gcaggcccgcaagagtgtgtgaagggaacggtgggcacgctcctgctggaaaacccacct
gggcagaatggactcacccaccagggccttctgtatgaggcagccaaggtgtttggcctt
cgcagcaggaagctcaagctgtttctgaatgagactcagacacacgaaataacggaagaa
atccccatgaagactttgaacatgaagactgtgtatgtttctgtattaccgacgacagca
gacttctaa
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integrated database retrieval system
