Zalophus californianus (California sea lion): 113934914
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Entry
113934914 CDS
T07874
Symbol
TRAF1
Name
(RefSeq) TNF receptor-associated factor 1 isoform X1
KO
K03172
TNF receptor-associated factor 1
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca04064
NF-kappa B signaling pathway
zca04210
Apoptosis
zca04668
TNF signaling pathway
zca05200
Pathways in cancer
zca05202
Transcriptional misregulation in cancer
zca05203
Viral carcinogenesis
zca05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
113934914 (TRAF1)
04668 TNF signaling pathway
113934914 (TRAF1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
113934914 (TRAF1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
113934914 (TRAF1)
05202 Transcriptional misregulation in cancer
113934914 (TRAF1)
05203 Viral carcinogenesis
113934914 (TRAF1)
09162 Cancer: specific types
05222 Small cell lung cancer
113934914 (TRAF1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
XLF_CC
PilJ
Ned1_M
Motif
Other DBs
NCBI-GeneID:
113934914
NCBI-ProteinID:
XP_027472324
UniProt:
A0A6J2ETD8
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All DBs
Position
13:13793081..13822699
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AA seq
415 aa
AA seq
DB search
MASGPASSPHPAPDENEFPFGCPPTVCQDPTEPRALCCAACLSETVRTSEDQICPKCRGD
DPQSVSPASLVSQEKDHPEEAEAEVGCPFAGVGCSYKGSRKLLQEHEVTSQTTHLNLLLG
FLNQRKAQQASGLGSRPMALEQNLSDLQLQAAVEVAGDLEVDCYRAPRSESQDELALQHF
MKEKLLAELEGKLRVFENIVAVLNKEVEASHLALAASIHQSQLDREHILSLEQRVVELQQ
TLTQKDQALGKLEQSLRLMEEASFDGTFLWKITNVTRRCHESACGRTLSLFSPAFYTAKY
GYKLCLRLYLNGDGTGKRTHLSLFIVIMRGEYDALLPWPFRNKVTFMLLDQNNREHAIDA
FRPDLSSASFQRPQGETNVASGCPLFFPLNRLQSPKHAYVKDDTMFLKCIVETSA
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctggcccagccagcagcccccacccggcccctgatgagaacgagtttcccttt
gggtgcccccccaccgtctgccaggacccaacagagcccagggctctctgctgtgcagcc
tgtctctctgagaccgtgaggacaagcgaggaccagatctgtccaaaatgcagaggggac
gacccccagtctgtaagcccggcaagccttgtgtctcaggagaaggatcaccctgaggag
gctgaggctgaagttgggtgcccctttgctggtgttggctgctcctacaaggggagccga
aagctcctgcaggagcatgaggtcacctcccagaccacccacctaaacctgcttttgggg
ttcctgaatcagcggaaggcccagcaggcctcaggcctggggtctaggcccatggccctg
gagcagaatctgtcagacctgcagctgcaggcagccgtggaggtggcaggggacctggag
gtggactgctaccgggcgccacgctccgagagccaggacgagctggccctgcagcacttc
atgaaggagaagctcctggctgagctggaggggaagctgcgcgtgtttgagaacatcgtc
gctgtcctcaacaaggaggtggaagcctcccacctggctttagcagcctccatccaccag
agccagcttgaccgggagcatatcctgagcttggaacaacgggtggtggagctgcagcag
accctgactcagaaagaccaggccctgggcaagctggagcagagcctccgcctcatggag
gaggcctccttcgatggcacctttctctggaagatcaccaatgtcaccaggcgctgccac
gagtcagcctgtggcaggaccctcagcctcttctccccagctttctacactgccaagtac
ggctacaaactctgcctgcgtctctacctgaacggagacgggacgggaaagaggacccac
ctgtcgctcttcatcgtgatcatgagaggggagtacgatgctctgctgccctggcctttt
cggaacaaggtcaccttcatgctgctcgaccagaacaaccgcgagcatgccatcgacgcc
ttccggcctgacctgagctcagcatccttccagcggccccagggtgagaccaacgtggcc
agtggctgcccgctcttcttccccctcaacaggctacagtcgcccaagcacgcctacgtg
aaggatgacaccatgttcctcaagtgcatcgtggagacaagcgcttag
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