Zalophus californianus (California sea lion): 113935552
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Entry
113935552 CDS
T07874
Symbol
NPHS1
Name
(RefSeq) nephrin isoform X1
KO
K24496
nephrin
Organism
zca
Zalophus californianus (California sea lion)
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
zca04990
]
113935552 (NPHS1)
Domain-containing proteins not elsewhere classified [BR:
zca04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
113935552 (NPHS1)
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
C2-set_2
I-set
Ig_2
ig
V-set
fn3
C2-set_3
Ig_DSCAM-DSCAML_C
DUF4643
Motif
Other DBs
NCBI-GeneID:
113935552
NCBI-ProteinID:
XP_027473432
UniProt:
A0A6J2F2W7
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All DBs
Position
17:complement(43827923..43849125)
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AA seq
1244 aa
AA seq
DB search
MALRTPIRAPLLLTGLLTAGLAQLPLPASAPRGFWALPENLTVVEGATAELRCGVSAPGS
VVQWAKDGLLLGPDPRISSFPRYRLEGDPTRGEFHLHIEACDLSDDAEYECQVGRSETGP
ELVSPRVILSILGMVPPKVLQLTPEAGSTVTWVAGQEYMVSCVSGDAKPAPDITFFQSGQ
TISDISANVNAGSQEKLFTTEATARVTPQSSDNGQLLVCEGSSPALDTPIRVSVTMNVLF
PPGPPVIEWPGLDEGHVRAGQSLELLCVARGGNPPATLQWLKNGQSMSTAWGTEHGEAVA
RSMLVMIVRPEDHGARLSCEAHNSVSTGIQERGVTLQVTFPPSAITILGSASQSENKNVT
LSCITKSSRPRVLLRWWLGWRQLVPTEEMVMDGLHGGHVSMSNLTFLVRREDNGLTLTCE
AFSEAFAKETFKKSLTLNVKYPAQKLWIEGPPEGQRLRAGTRVRLLCLAIGGNPDPSLTW
LKDSRMVTEPRPPQEPRRVQLGSLEKSGSTFSRELVLIMGPSDNQAKFTCKAGQLSASTQ
LVVQFPPTNVTILANATALRPGDALNLTCISVSSNPPVNLSWDKEGERLESVATPPRSAP
FRGSAAARSVLLRMSSRDHGHQVTCRAHSPELRETMSAFHRLNVLYPPEFLGEQVLVVTA
VEQGEALLPVSVSANPAPEAFNWTFRGYRLSPAGGPRHRILSGGALQLWNVTRADDGLYQ
LHCQNSEGTAETLVRLDVHYAPTIRALQDPTEVNIGGSVDIVCTVDANPILPGMFNWERL
GEKEEDQSLDEMEKMSKGATGRLRIHHAKLAQAGAYQCIVDNGVAPPARGLVRLVVRFAP
QVEHPTPLTKVAAAGDSTSSATLHCRAQGVPNIVFTWTKNGVPLDLQDPRYTEHTYHQGG
VHSSLLTIANVSAAQDYALFTCTATNPLGSDHTNIQLVSISRPDPPSGLKVVSMTPYSVG
LEWKPGFDGGLPQRFQIRYEALGTPGFFYVDVLPPEATTFTLTGLQPSTRYRVWLLASNA
LGDSGLTHKGSQIPITTPGLDQPSGEPDYQLPTEQPAEPTELPLLPVLFAAGGLLLLSNI
SCVGGFLWQRRLRRLAEGITEKTEAGSEEDRVKNEYEDSQWTGDRDTQSSTVSTTDVEPY
YHSMKNFSPRLPPTLEEVYYPGGFTHLEEEDMVFPGHLYDEVERLYAPPGAWGPLYDEVP
MSPFDPCRPEETYEDTRGIYDRVAGDLDPMEPDSLPFELRGHLV
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atggctctgaggacccccatcagggctcccctgctcctcacggggctgctgacagcaggc
ctggcccagttgccgctccctgcctcagccccgcgaggcttctgggctctgcctgaaaac
ttgacggtggtggagggggccactgctgagctgcggtgtggggtcagcgcccctggcagt
gtggtgcaatgggccaaggatgggctactcctgggcccggatcctaggatctccagcttc
ccgaggtaccgcctggaaggggaccctactagaggtgaattccacctgcatattgaagcg
tgtgacctgagtgacgatgcagagtatgagtgccaggtcggccgctcagagacaggccct
gagcttgtgtctcccagagtgatcctctccatcctgggtatggtgccccccaaggtgctt
cagctgacccccgaggcagggagcacagtcacgtgggtagctgggcaagagtacatggtc
agctgtgtatctggggatgcaaagccagcacctgacatcaccttcttccagagtggacaa
acaatttctgacatctctgctaatgtgaatgcggggtcccaggagaaactcttcaccaca
gaggccacagccagggtgacaccccagagctcagataatgggcagctcctggtctgtgag
gggtccagcccagcactggacactcccatccgggtctcagtcaccatgaatgttctgttc
cccccaggaccccctgtcatagagtggccaggcctggacgaggggcacgttcgggcagga
cagagcttggagctgctttgtgtggcccgaggggggaatccgccagccacactgcagtgg
ctgaagaatggccagtccatgtccacagcgtggggcacagagcatggtgaggcagtggcc
cgaagcatgctagtgatgattgtgcgaccggaagaccatggggcgaggctcagctgtgag
gctcacaacagtgtatctacagggatccaggaacgcggggtcacgctgcaggtcaccttc
ccccccagtgccattaccatcttgggatctgcatcccagtctgagaacaagaacgttacg
ctctcctgcatcaccaagtccagtcgcccacgggtcctgttacgatggtggctgggttgg
cggcagctggtgcctacagaagagatggtcatggatggcctgcatggtggccacgtctcc
atgtccaacctgacgttcctggtccgacgagaggacaatggtctgactctcacatgtgag
gcctttagtgaggcctttgccaaggagactttcaagaagtcactcaccctgaacgtgaaa
tatcctgcccagaagctgtggatagagggtcccccagagggacaacggctccgggctggg
actcgagttaggctcctgtgtttggccattgggggcaacccagacccctctcttacctgg
ctcaaggactcccggatggtgaccgaaccgcggccaccccaggagccacggcgggtgcag
ctgggaagtctggagaagtcagggagcacgttctcccgagagcttgtactgatcatgggt
ccatcggacaaccaggccaagttcacatgcaaggcgggtcagctcagcgcatccacgcag
cttgtggtgcagtttcccccaacaaatgtgacgatcctggccaacgcaacggctctgcgc
ccaggggatgcattaaacttgacttgcatcagcgttagcagcaaccctcctgtcaacttg
tcgtgggacaaggagggggagaggctggaaagcgtggccacaccaccccgtagtgcccca
ttcagaggctctgcagcagccaggagtgtccttctgagaatgtcatcccgagaccatggc
caccaagtgacctgccgagcccacagccctgagctccgggaaaccatgagcgccttccac
cgcctcaatgtgctgtaccctccagagttcctaggggagcaggtgcttgtggtgaccgct
gtggagcagggtgaggcactgctgccggtgtctgtatctgccaaccctgccccggaggcc
ttcaactggaccttccgcggctaccgcctcagcccagctggtggccctcggcatcgcatc
ctgtctggtggagccctgcagctatggaatgtgacccgagctgacgatggcctctatcag
ctgcattgccagaactcggagggcactgctgaaactctagtgcggctggatgtacactat
gcccccactatccgagctctccaggacccaactgaggtgaatatcgggggttctgtggat
atagtctgcactgttgatgccaatcccatccttccagggatgttcaactgggagaggctg
ggagaaaaggaggaggaccagagcctggatgagatggagaagatgtcaaagggagccaca
gggcgtcttcgaattcaccatgccaaactggcccaggctggtgcttaccagtgcattgtg
gacaatggagtggcacctccagcccgaggactggtccgacttgttgtcagatttgccccc
caggtggagcaccctactcccctaactaaggtggctgcagctggagatagcaccagttct
gccaccctccactgtcgtgcccaaggcgtccccaacatcgtcttcacttggaccaaaaat
ggagtccctctggacctccaggatcccaggtacacagagcacacataccaccagggtggg
gtccacagcagtctcctgaccattgccaacgtgtctgcagcccaggattacgccctcttc
acgtgcacagccaccaacccccttggctcagatcacaccaacattcaactcgtcagcatc
agtcgcccggatcccccatcaggattaaaggttgtgagcatgactccatattcggtgggg
ttggaatggaaacctggctttgatgggggtttgccacagaggttccaaatcagatacgag
gcactggggacaccagggttcttctacgtggatgtcctaccacctgaggccaccaccttc
acactgactgggctgcagccctctacacgatacagagtctggctgctggccagcaatgcc
ctgggggacagcggactaactcacaaggggtcccagattcctatcactaccccaggtcta
gaccagccttctggagaacctgactaccagctgcccacagagcagcctgcagaacccaca
gagctgcccctgttgcctgtgctgtttgctgctgggggtcttttgctgctttctaacatc
tcctgtgttgggggattcctctggcagcggagactgaggcgtcttgctgaaggcatcaca
gagaagacagaagcagggtcggaggaggaccgagtcaagaatgaatatgaggacagccag
tggaccggagacagagacactcaaagctccacggttagcacaacggatgtagaaccatat
taccactccatgaagaacttcagcccccggctgccaccaacactggaggaggtgtattat
cccggaggtttcacacatcttgaagaggaggatatggtttttcctggacacctgtatgat
gaggtggaaagactgtatgccccacctggagcctggggacccctctacgatgaagtacca
atgagcccctttgacccctgccgacctgaggagacatatgaggatacaagaggaatctat
gatcgggtggcaggagacttggaccctatggaacctgattctctaccctttgagctgagg
ggacatctggtgtga
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