Zalophus californianus (California sea lion): 113939623
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Entry
113939623 CDS
T07874
Symbol
RFNG
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe isoform X1
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca00514
Other types of O-glycan biosynthesis
zca04330
Notch signaling pathway
zca05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
113939623 (RFNG)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
113939623 (RFNG)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
113939623 (RFNG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
zca01003
]
113939623 (RFNG)
Enzymes [BR:
zca01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
113939623 (RFNG)
Glycosyltransferases [BR:
zca01003
]
Glycan extension
O-Glycan
113939623 (RFNG)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fringe
Motif
Other DBs
NCBI-GeneID:
113939623
NCBI-ProteinID:
XP_027481823
UniProt:
A0A6J2FP60
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All DBs
Position
16:complement(61750289..61754425)
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AA seq
351 aa
AA seq
DB search
MSRVRGALCRACLALAAALAALLLLPLPLPLPLPRMPVPAPAPAPAPAPAPTPGPGRRAS
PPRPATAPRLRPDDVFIAVKTTQKNHGPRLGLLLSTWISRARKQVVSPQTFIFTDGDDPE
LQLQGGSHIINTNCSAVHTRQALCCKMSVEYDTFIESRRKWFCHVDDDNYVNPKALLRLL
STFSPSQDVYLGRPSLDHPIEAAERVQGGGTVTTVKFWFATGGAGFCLSRGLALKMSPWA
SLGSFMSTAERVRLPDDCTVGYIVEGLLGARLLPSSLFHSHLENLQRLPPDAVLQQVTLS
YGGPENPRNVVNVAGGFSLQQDPTRFKSVHCLLYPDTEWCPVHKQSDPVSR
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcgtgcggggggcgctgtgccgggcctgcctcgcgctggccgcggccctggcc
gcgctgctgctgctgccgctgccgctgccgctgccgctgccccgcatgccggtgccggcg
ccggcgccggcccccgccccggccccggctccgactccgggtcccggccggagggcgtcc
cccccccgacccgccaccgccccccgcctgcggccggacgacgtcttcatcgctgtcaag
accacccagaagaaccacgggccacgactggggctgctactgagcacctggatctctcgg
gcccgcaaacaggttgtctctccccagacattcatcttcacggacggggatgaccctgag
ctacagctccagggaggcagccacataatcaataccaactgctcagccgtgcacactcgc
caggcgctgtgctgcaagatgtccgtggagtacgacacgttcatcgagtcgagacgcaag
tggttctgccatgtggatgatgacaattatgtgaaccccaaagccctgctgcggctgctg
tccaccttctcgcccagtcaggacgtctacctggggcggcccagcctggaccaccccatc
gaggccgctgagagagtccagggagggggcactgtgaccactgtcaagttttggttcgcc
acgggcggggccgggttctgcctgagcagaggcctcgcgctgaagatgagcccctgggcc
agtctgggcagcttcatgagcacagccgagcgggtgcggctgccggatgactgcacagtg
ggttacatcgtggaggggctgctgggcgctcgcctgctgcctagctcgctcttccattcc
cacctggagaacctgcagaggctgccgcccgacgccgtgctgcagcaggtcaccttgagc
tacgggggtccagagaacccacgtaatgtggtgaacgtggccggaggcttcagcctgcag
caggaccccacacggttcaagtctgtccattgccttctctacccggacacggagtggtgt
cctgtgcacaagcagagtgaccccgtttctcggtga
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