Zalophus californianus (California sea lion): 118357375
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Entry
118357375 CDS
T07874
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca03018
RNA degradation
zca03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118357375
09123 Folding, sorting and degradation
03018 RNA degradation
118357375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zca03019
]
118357375
03041 Spliceosome [BR:
zca03041
]
118357375
Messenger RNA biogenesis [BR:
zca03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
118357375
mRNA degradation factors
5'-3' decay
Lsm complex
118357375
Spliceosome [BR:
zca03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
118357375
Complex C
U2 snRNP components
118357375
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
TIG_SUH
vATP-synt_E
RimP_C
Motif
Other DBs
NCBI-GeneID:
118357375
NCBI-ProteinID:
XP_035585257
UniProt:
A0A6J2CLP1
LinkDB
All DBs
Position
9:complement(110927337..110927905)
Genome browser
AA seq
102 aa
AA seq
DB search
MADDVDQQQTTNTVEEPLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEET
VTTIEIDEETYEEIYKSTKRNIPMLFVRGDGVVLVAPPLRVG
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgacgtggaccagcaacaaactaccaacactgtagaagagcccctggatctc
atcaggctcagcctggatgagcgaatttatgtgaaaatgagaaatgacagagagcttcga
ggcagattacatgcttatgatcagcatttaaatatgatattgggagatgtggaagaaact
gtgactactatagaaattgatgaggaaacatacgaagagatatataaatcaacaaaacgg
aatattccaatgctttttgtccggggagatggtgttgtactagttgcccctcctttaaga
gttggctga
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