Zeus faber (John dory): 307227268 Help Entry 307227268         CDS       T12102                                  Symbol thbs1b Name (RefSeq) thrombospondin-1   KO K16857   thrombospondin 1 Organism zfa  Zeus faber (John dory) Pathway zfa04115   p53 signaling pathway zfa04145   Phagocytosis zfa04148   Efferocytosis zfa04350   TGF-beta signaling pathway zfa04510   Focal adhesion zfa04512   ECM-receptor interaction zfa04518   Integrin signaling zfa04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:zfa00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     307227268 (thbs1b)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     307227268 (thbs1b)    04518 Integrin signaling     307227268 (thbs1b)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagocytosis     307227268 (thbs1b)    04148 Efferocytosis     307227268 (thbs1b)   09143 Cell growth and death    04115 p53 signaling pathway     307227268 (thbs1b)   09144 Cellular community - eukaryotes    04510 Focal adhesion     307227268 (thbs1b)   09142 Cell motility    04820 Cytoskeleton in muscle cells     307227268 (thbs1b)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:zfa04131]     307227268 (thbs1b)   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:zfa00536]     307227268 (thbs1b) Membrane trafficking [BR:zfa04131]  Endocytosis   Phagocytosis    Opsonins     307227268 (thbs1b) Glycosaminoglycan binding proteins [BR:zfa00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    307227268 (thbs1b) SSDB OrthologParalogGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C VWC2L_2nd EGF_3 TSP1_ADAMTS cEGF Laminin_G_3 EGF TSP1_CCN Motif Other DBs NCBI-GeneID:  307227268 NCBI-ProteinID:  XP_079852667 LinkDB All DBs Position 2:complement(20453433..20465771) Genome browser AA seq 1169 aa AA seqDB search MKLTGIFLLLMLWSCNGARVAESRDDNSVFDLFELVQVPKKNHGVTQVKGDDPYSPAYKI LNPDLIPPVPEGSLRDLVDSIHAERGFLLLLNLKQFKRTRGGLLTVEKTDGSGPVFELIS NGKANTLDIVFSTENKQQVVSIEDADLATGHWKNITLFVQEDRVQLFAGCEEVNSAELDA PIQTILTQETPTGARLRIGKGAVKDRFMGVLQNVHFVFGTTLDAILRNKGCQNSMPTDTL LLENLNGSSAIRTEYTGHKTKDLQMVCGFSCEDLASMFKELRGLGVVVKELSNELRQLTD ENKLIKNRIGIHSGVCIHNGMVHKNRDEWTVDDCTECTCQNSATVCRKISCPLIPCANAT VPDGECCPRCGTPSDYAEDGWSPWSEWTHCSVSCGRGIQQRGRSCDRINNNCEGTSVQTR DCYLQECDKRFKQDGSWSHWSPWSSCSVTCGAGVITRIRLCNSPTPQLGGKDCEGEGRQT ETCQKSPCPINGNWGPWSPWDTCTVTCGGGTQTRKHLCNDPVPKYGGKECVGDAKDTQMC NRKACPIDGCLSNPCFAGAKCTSFPDGSWKCGKCPTGYTGNGIKCKDIDECKEVPNACFE FNGVHRCENTDPGYNCLPCPPRYSGPQPFGKGVEEAAAKKQVCTPRNPCLDGSHDCNKNA RCNYLGHFADPMYRCECKPGYAGNGHICGEDTDLDGWPNANLVCVENATYHCKKDNCPNL PNSGQEDYDKDGIGDACDNDDDNDGIPDDRDNCPFIYNPRQYDYDRDDVGDRCDNCPYNS NPDQTDTDNNGEGDACAVDIDGDGILNEKDNCPYVYNVDQRDTDLDGVGDMCDNCPLEHN PDQVDSDDDRVGDKCDSNQDIDEDGHQNNLDNCPYIPNANQADHDKDGRGDACDHDDDND GIPDDKDNCRLAFNPDQLDSDGDGRGDACKDDFDQDNVPDIYDVCPENFDISETDFRKFQ MVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGYDEFNAVDFSGTFFINTERDDD YAGFVFGYQSSSRFYVVMWKQITQTYWSSKPTKAQGYSGLSIKVVNSTTGPGEHLRNALW HTGNTPGQVRTLWHDPKNIGWKDFTAYRWHLIHRPRTGHIRVVMYEGKKIMADSGSIYDK TYAGGRLGLFVFSQEMVYFSDLKYECRDA NT seq 3510 nt NT seq  +upstreamnt  +downstreamnt atgaagctgactgggatatttttgctgttgatgctctggagctgcaatggtgcaagagtg gcagagagccgagacgacaacagtgtgttcgacctgttcgagttggtccaggtccccaag aagaaccatggggtcacccaggtgaagggggacgacccctacagcccggcctacaaaatc ctcaaccctgacctgatccccccggtgcccgaggggtccctcagggacctggtggactcc atccacgccgagaggggcttcctccttctgctcaacctcaagcagttcaagaggacccga gggggcctgctgacggtggagaagaccgatggctctgggcccgtgttcgagctgatttcc aacggcaaggccaacaccctggacattgtcttctccacggagaacaagcagcaggtggtg tccatcgaggacgctgacctggccacgggccactggaagaacatcacgctgttcgtgcag gaggaccgagtgcagctctttgcaggctgcgaggaggtgaactcggccgagctggacgca cccatccagaccatcttgacacaggagactcccaccggggcccggctgcggattggcaag ggggccgtgaaggacaggttcatgggggtgctccaaaatgtgcactttgtgtttggaact accctggacgccatcctgcgcaacaagggatgccaaaactccatgccgaccgacaccctg ctcctggagaaccttaacggctcctctgccatcaggactgagtacaccggccataagacc aaggacctgcaaatggtttgcggcttctcctgcgaggacctcgccagtatgttcaaggag ctgagaggtttgggggtggtggtcaaggagctgtccaacgagctccggcagctgacggat gagaacaagctgatcaagaaccgtatcggcattcacagcggcgtctgcatccacaacggc atggtccacaagaacagggacgagtggaccgtggacgactgcaccgagtgcacttgtcaa aactctgccacggtctgtcgtaagatctcatgcccgctgatcccctgtgccaacgccact gtgcccgatggagagtgctgcccacgctgtggaacaccgagcgactatgcagaggacggc tggtccccttggtctgaatggacccattgttccgtgtcgtgtgggcgtggcatccagcag cgcgggcgctcctgcgatcgcatcaacaacaactgcgagggcacctcggtgcagacccgc gactgctacctccaggagtgcgataagcgcttcaagcaggatggcagctggagccactgg tccccgtggtcgtcctgctcagttacctgcggagccggcgtcatcactcgcatccgcctc tgcaactcccccaccccccagctgggaggcaaagactgcgagggcgagggccggcaaacc gagacgtgccagaagtctccgtgtcccatcaatggtaactggggaccgtggtcaccgtgg gatacctgtacagtcacctgtggaggtgggacccagacccgtaagcatctgtgcaatgac ccggtgccaaaatacggtggcaaggagtgtgtgggcgacgccaaggacacccagatgtgt aacaggaaagcctgtccaattgacggctgcctgtccaacccttgctttgctggagcaaag tgcactagcttccccgatggctcctggaagtgcgggaagtgtcccacgggctacaccggc aacggcattaagtgcaaagacattgacgagtgcaaggaggttcccaacgcctgcttcgag ttcaatggcgtgcaccgctgtgagaacacagatccgggttacaactgtctgccctgccct ccacgttactctggaccccagccctttggcaagggtgtggaagaggccgctgccaagaaa caggtctgcacgccccgcaacccgtgcctggacggaagtcatgactgcaacaagaacgcc cgctgcaactacctgggacactttgccgaccccatgtaccgctgcgagtgcaagccaggc tacgccggcaacggacacatttgcggagaggacacggatctggacggctggcccaacgcc aacctggtgtgcgttgagaacgccacctaccactgcaagaaggacaactgccccaacctc cccaactctggtcaggaagactatgacaaggacggcattggagatgcttgtgacaatgat gacgacaatgatggcattcccgatgatagggacaactgcccattcatctacaaccccagg caatatgactatgaccgtgacgatgtgggcgaccgctgcgacaattgtccgtacaacagc aacccggaccagacggacacggacaacaacggagagggcgacgcctgcgccgtggacatc gatggagatggcattctgaacgagaaggacaattgcccctacgtgtacaatgtggaccag agagacaccgatctggatggtgttggagacatgtgcgacaactgcccattggagcataat cccgatcaggtggattccgacgatgatcgtgtaggcgacaagtgtgacagcaaccaggac attgacgaagatggccatcagaacaacctggacaactgcccctacatccccaacgccaac caggctgaccacgacaaggatggcagaggagacgcctgcgaccatgatgacgacaatgac ggaattcctgacgataaggacaattgccgactggcctttaaccccgatcagctggactca gatggtgacggccgtggtgacgcttgcaaagacgacttcgaccaagacaacgtgccggac atctacgatgtatgcccagagaactttgacatcagcgagacagatttccgcaagttccag atggttcccctggaccccaaaggcacctcccagatagatcctaactgggtggtacgccat cagggcaaggagctggtccaaaccgtcaactgtgaccctggcatcgccgtgggttatgac gagttcaacgcagtcgacttcagcggcacattcttcataaacacagagagggatgacgat tatgccggctttgtgttcggctaccagtcaagctccaggttctacgtggtgatgtggaag cagatcacgcagacctactggtctagtaaacccactaaagcccagggctactccggcctc tccatcaaagtggtcaattccaccacaggtccaggagagcacctcaggaatgccctgtgg catacgggcaacacgccgggacaggtacgcactctgtggcacgaccctaagaatattggc tggaaagacttcactgcctacaggtggcatctgatccatagacccagaacaggacacatt cgagttgtgatgtacgagggaaagaagatcatggcagactctgggagcatctacgacaag acctatgccggtggaaggctaggtcttttcgtcttctcgcaagagatggtttacttctca gacctcaagtatgaatgcagagatgcatag

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