KEGG   Zeus faber (John dory): 307237008
Entry
307237008         CDS       T12102                                 
Symbol
rbx1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1 isoform 1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
zfa  Zeus faber (John dory)
Pathway
zfa03420  Nucleotide excision repair
zfa04110  Cell cycle
zfa04114  Oocyte meiosis
zfa04120  Ubiquitin mediated proteolysis
zfa04141  Protein processing in endoplasmic reticulum
zfa04310  Wnt signaling pathway
zfa04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:zfa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    307237008 (rbx1)
   04120 Ubiquitin mediated proteolysis
    307237008 (rbx1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    307237008 (rbx1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    307237008 (rbx1)
   04350 TGF-beta signaling pathway
    307237008 (rbx1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    307237008 (rbx1)
   04114 Oocyte meiosis
    307237008 (rbx1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:zfa04121]
    307237008 (rbx1)
   03400 DNA repair and recombination proteins [BR:zfa03400]
    307237008 (rbx1)
Enzymes [BR:zfa01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     307237008 (rbx1)
Ubiquitin system [BR:zfa04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   307237008 (rbx1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     307237008 (rbx1)
   Cul2 complex
     307237008 (rbx1)
   Cul3 complex
     307237008 (rbx1)
   Cul4 complex
     307237008 (rbx1)
   Cul7 complex
     307237008 (rbx1)
   Cul8 complex
     307237008 (rbx1)
   Cul9 complex
     307237008 (rbx1)
DNA repair and recombination proteins [BR:zfa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      307237008 (rbx1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      307237008 (rbx1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 DUF8003
Other DBs
NCBI-GeneID: 307237008
NCBI-ProteinID: XP_079865735
LinkDB
Position
11:complement(<11127181..11129054)
AA seq 108 aa
MAAAMDVDTPSGTNSGASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcggcggcgatggacgtagacaccccaagcggcacgaacagcggagcgagcaagaag
cgttttgaggttaaaaagtggaatgccgtggcactgtgggcatgggacatcgtcgtggat
aactgtgctatctgtcggaatcatattatggacctttgtatagagtgccaggccaaccaa
gcctctgccacatctgaggagtgcactgtggcctggggtgtctgcaaccacgcgttccat
ttccactgcatttcccgttggctgaagaccagacaggtgtgtcctctagacaacagagag
tgggagtttcagaaatatggacactag

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