Zeus faber (John dory): 307239100 Help Entry 307239100         CDS       T12102                                  Symbol thbs1a Name (RefSeq) thrombospondin-1   KO K16857   thrombospondin 1 Organism zfa  Zeus faber (John dory) Pathway zfa04115   p53 signaling pathway zfa04145   Phagocytosis zfa04148   Efferocytosis zfa04350   TGF-beta signaling pathway zfa04510   Focal adhesion zfa04512   ECM-receptor interaction zfa04518   Integrin signaling zfa04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:zfa00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     307239100 (thbs1a)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     307239100 (thbs1a)    04518 Integrin signaling     307239100 (thbs1a)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagocytosis     307239100 (thbs1a)    04148 Efferocytosis     307239100 (thbs1a)   09143 Cell growth and death    04115 p53 signaling pathway     307239100 (thbs1a)   09144 Cellular community - eukaryotes    04510 Focal adhesion     307239100 (thbs1a)   09142 Cell motility    04820 Cytoskeleton in muscle cells     307239100 (thbs1a)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:zfa04131]     307239100 (thbs1a)   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:zfa00536]     307239100 (thbs1a) Membrane trafficking [BR:zfa04131]  Endocytosis   Phagocytosis    Opsonins     307239100 (thbs1a) Glycosaminoglycan binding proteins [BR:zfa00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    307239100 (thbs1a) SSDB OrthologParalogGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC VWC2L_2nd EGF_3 TSP1_ADAMTS EGF_CA TSP1_CFP_C cEGF EGF TSP1_CCN Laminin_G_2 Motif Other DBs NCBI-GeneID:  307239100 NCBI-ProteinID:  XP_079868486 LinkDB All DBs Position 13:complement(16518627..16527576) Genome browser AA seq 1174 aa AA seqDB search MMMLCSIVLLLMLWDSEGRSMAESGDDNSVYDLFELARVNKRNHGVTLVRGADPYSPAYK ILNADLIPPVPDTSFRDLIDSIQAERGFLLLANLKQFRKTKGSLLTVEKTDGSGSVLEII SNGKANTLDVVYTSRNQQKVVSIEEADLASGHWKNITLFVQDDRAQLFVGCEEINVSDEM DLPIYKILSQEIADVSRLRIGKGTARDRFTGVLQNVRFVFGTTLEAILRNKGCQSGAALT DVMTLDNPVNGSSPAIRTDYTGHKAKDLQSVCGFSCEDIAGMFKELKGLGVVVKQLSNDL RKVSADSTLLMNQMKIHSGVCLHNGIVHRDQDEWTVDGCTECTCQNSATVCRKISCPLIP CTNATVPDGECCPRCGTPSDYALDRWSPWSEWTPCSVTCGRGIQQRGRSCDRINSNCDGT SVQTRDCYPQECDKRFKQDGGWSHWSPWSSCSVTCGEGINTRIRLCNSPTPQMGGRDCEG QGRETEVCQKSACPINGGWGPWSLWGTCTVTCGGGLHSRKRLCTEPAPKHGGKDCVGGAI MSQVCNKQQCPIDGCLSSPCFAGTKCTSFPDGSFKCGRCPVGYIGNGIVCKDIDECKQVP DACHTYNGVHRCENTEPGYNCLPCPPRYSGPQPFGRGVEQATAKKQVCKPRNPCQDGSHD CNKNANCIYLGVYSDAMFRCECKPGYAGNGFICGGDTDLDGWPNTDLLCVENATYHCKKD NCPNLPNSGQEDHDKDGLGDECDHDDDNDGIPDDRDNCPKVYNPAQYDADRDDIGDRCDN CVFEANTDQTDTDNNGEGDACAIDIDGDGILNEKDNCPYVYNMDQRDSDRDGVGDHCDNC PLEHNPDQIDSDSDLVGDKCDSNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACDH DDDNDGIPDDKDNCRLAFNPDQLDSDGDGRGDVCKDDFDQDSVLDIYDVCPENFAISETD FRRFQMVPLDPKGTSQIDPNWVVRHRGKELVQTVNCDPGIAVGYDEFNAVDFSGTFFINT DRDDDYAGFVFGYQSSSRFYTVMWKQITQTYWSPTPTRAQGYSGLSIKVVNSTTGPGEHL RNALWHTGDTAGQVRTLWHDPKNIGWKDYTAYRWHLIHRPKSGLIRVVMYEGKRIMADSG NIYDKTYAGGRLGLYVFSQEMVYFSDLKYECRDS NT seq 3525 nt NT seq  +upstreamnt  +downstreamnt atgatgatgctgtgcagcatcgttctgctcttgatgctttgggatagtgaaggcaggagt atggcagagagtggggatgacaacagtgtgtatgacctgtttgagcttgcaagagtgaac aagagaaatcatggggtcaccctggtgagaggagcagacccatacagccctgcctacaag atcctcaacgctgacctgatccccccagtccccgacacctccttcagggacctcatcgac tccatccaggcagagaggggattcctcctcctggccaacttaaagcagttcaggaaaacc aaaggcagccttttgaccgtggagaagactgacggctccgggtcggttttagagatcatc tccaatggcaaggcaaacaccctggatgtggtttacaccagcaggaaccagcagaaggtc gtgtcgatagaggaggcagacctggccagtgggcactggaaaaatatcacgctgtttgtc caggacgaccgtgctcagctgtttgtgggctgtgaggagatcaatgtgtcggatgagatg gatttgccaatctacaaaatactgtcgcaggagattgcagacgtttcccgtctgaggatt ggaaagggaactgcgagagaccgattcacgggagtgcttcagaatgtacgctttgtcttt gggacaactctggaagccatattgagaaataagggatgccaaagtggagctgccttgact gatgtcatgaccctggacaacccagtcaacggctccagccccgccattaggactgattac acgggccacaaagccaaagatctgcagtccgtctgtggcttctcctgtgaggacatcgcc ggcatgtttaaggagctcaagggactcggtgtggttgttaaacagctgtcgaacgatctc cgcaaagtgtccgccgatagcacactgctaatgaaccagatgaagatccacagcggcgtc tgcctccacaatggcatcgtgcacagggaccaagatgagtggaccgtggacggctgcaca gagtgtacctgccagaactctgctactgtgtgtcgcaaaatctcctgccctctcatcccc tgcaccaacgccaccgtgcccgacggagagtgctgccctcgctgtggaaccccgagtgac tatgcattggacagatggtccccctggtccgaatggacgccttgttccgtgacgtgcggc cggggaatccagcagcgcggacgctcctgcgaccgcatcaacagcaactgtgacggcacc tctgtgcagacccgtgactgctaccctcaggagtgtgacaagcgctttaaacaggatggt ggttggagccactggtctccctggtcatcatgttctgtcacctgtggcgagggcatcaac acccgcatccgcctctgcaactcacccacaccccaaatgggcggaagggactgcgaagga caaggaagagaaactgaagtttgccagaagtccgcttgtccgatcaatgggggttgggga ccctggtctctttggggtacctgcaccgttacgtgtggtggaggacttcacagccgcaaa cgtctctgtactgaacctgcgcccaaacatggaggaaaggactgcgttggtggtgccatt atgtctcaagtatgcaacaaacagcagtgtcctatcgatggttgtctttccagcccatgc tttgctggcactaagtgcaccagtttccctgatggctccttcaagtgtgggaggtgtcct gttggttacattgggaatggcatcgtctgtaaggacattgacgagtgcaaacaggtccct gatgcctgccacacttataatggagttcatcgctgtgaaaacacagagccaggttacaac tgcttgccctgccctccacggtactcgggaccgcagccctttggaaggggagtcgaacaa gccaccgccaagaaacaggtttgcaagccccgtaacccatgtcaggacggaagccacgac tgcaataaaaatgccaactgcatttacctgggcgtctactccgacgccatgttccgctgt gagtgcaagccaggttatgctggaaacggcttcatctgtggaggagacactgacttggac ggatggcccaacactgacctgctgtgtgtggagaatgctacctaccactgcaagaaggat aattgtcccaacctgcccaactctggtcaagaagatcacgacaaagatggcctgggtgac gagtgtgaccatgatgatgacaacgatggaatccctgatgatagggacaattgcccaaaa gtttacaaccctgcccagtatgacgctgacagagatgatattggtgaccgctgcgacaac tgtgtttttgaagctaacaccgatcaaaccgacacagacaacaatggagagggtgatgcc tgcgccattgacatcgacggtgatggcatcctgaatgagaaagacaattgcccgtacgtg tataacatggaccagagagacagtgacagggacggtgttggagaccactgtgacaactgc cctctggagcacaaccctgaccagattgactctgactcagacctcgtgggagacaagtgt gacagcaaccaggacattgacgaggacggccaccagaacaacttggacaactgcccctac attccaaatgccaatcaggcagatcatgacaaagatggcaagggtgacgcctgcgaccat gacgatgacaatgatggcattcctgatgacaaagacaactgcaggctggcctttaaccct gaccagctggactctgatggcgatggccgtggcgatgtgtgcaaagacgactttgaccaa gacagcgtgctggacatttatgatgtgtgcccagagaactttgccatcagcgaaactgac ttccgcaggttccagatggttcctctggaccccaagggcacctcccagattgaccccaac tgggtagtccgtcatcggggcaaggagctggtgcagaccgtcaactgtgaccctggcatt gctgtcggttacgatgagttcaatgcggtggatttcagtggaacattcttcatcaacaca gacagagatgacgactatgccgggttcgtgtttggctaccagtccagctcgcgtttctac acggtgatgtggaagcagatcacacaaacttattggtcccccaccccaacgagagcccag ggctactctggcctgtcaattaaggtggtcaactccaccacagggcctggcgagcacttg aggaatgccctctggcacacgggagacaccgccggacaggtgcgtactttgtggcacgat cccaagaacattggctggaaagactatacagcctacagatggcatctgatccacagaccc aagtctggactcattagagtggtgatgtacgagggtaagagaatcatggcggactctgga aacatctacgacaaaacatacgccggcggacgactaggcctgtacgtcttctctcaggag atggtttacttctcggacctcaaatacgaatgcagagattcataa

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