Zobellia galactanivorans: ZOBELLIA_4072
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Entry
ZOBELLIA_4072 CDS
T01586
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
zga
Zobellia galactanivorans
Pathway
zga03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
zga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ZOBELLIA_4072 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zga03400
]
ZOBELLIA_4072 (nth)
Enzymes [BR:
zga01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ZOBELLIA_4072 (nth)
DNA repair and recombination proteins [BR:
zga03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ZOBELLIA_4072 (nth)
Prokaryotic type
ZOBELLIA_4072 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
Motif
Other DBs
NCBI-ProteinID:
CAZ98208
UniProt:
G0L2U7
LinkDB
All DBs
Position
complement(4786893..4787555)
Genome browser
AA seq
220 aa
AA seq
DB search
MTKAEKIDFTITTLRDIYPSIPVPLDHKDPYTLLIAVLLSAQSTDVRVNKITPLLFERAD
NPYDMVKMSVEEIREIIKPVGLSPMKSKGIYGLSKILIDKYEGEVPKDIALLEELPAVGH
KTASVVVSQAFGIPAFPVDTHIHRLMYRWGFSNGKNVVQTEKDAKRLFPKELWNDLHLQI
IWYGREYSPARGWDLEKDIITKTIGRKTVIDAYYKTKKTR
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaagcggaaaagattgatttcaccattacgactttacgtgatatttatccctct
ataccggtgcccttagaccacaaagacccttatactttgttgatcgccgtattgttatcg
gcacaaagtaccgatgttcgggtgaacaagattacccccctattatttgaaagggccgat
aatccgtatgatatggttaagatgtcggtagaggaaattcgtgaaatcataaagcctgtg
ggcctctcccctatgaaatcaaagggaatctacggcttgtcaaaaatacttatcgataaa
tacgagggcgaggtaccgaaagacatagcgcttttggaagagttgcccgccgtgggacat
aaaacggccagtgtggtggtctcacaggctttcggtatacctgcttttcccgtagacacc
catattcataggcttatgtaccgttgggggttttcgaatggtaaaaatgtggttcaaacc
gaaaaagatgccaagcgcctgtttccaaaagaactttggaacgacttgcatcttcagata
atttggtacggaagggaatactctccggcccggggatgggatctagaaaaagatattata
acaaagaccatcggtagaaagaccgtaatcgatgcttactacaaaacaaaaaagacccga
taa
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