Ziziphus jujuba (Chinese jujube): 107420408
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Entry
107420408 CDS
T04794
Name
(RefSeq) uncharacterized protein LOC107420408
KO
K12173
BRCA1-A complex subunit BRE
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107420408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zju04121
]
107420408
03036 Chromosome and associated proteins [BR:
zju03036
]
107420408
03400 DNA repair and recombination proteins [BR:
zju03400
]
107420408
Ubiquitin system [BR:
zju04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
107420408
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
BRISC complex
107420408
Chromosome and associated proteins [BR:
zju03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
107420408
DNA repair and recombination proteins [BR:
zju03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
107420408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE
Motif
Other DBs
NCBI-GeneID:
107420408
NCBI-ProteinID:
XP_048331107
LinkDB
All DBs
Position
5:join(1883169..1883246,1883374..1883464,1883593..1883788,1883867..1883957,1884267..1884302,1884441..1884539,1884723..1884853,1884943..1884991,1885109..1885198,1885279..1885332,1885565..1885630,1886528..1886625,1886708..1886774)
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AA seq
381 aa
AA seq
DB search
MSAENVPPLIAAQLNYLLNHFPLPVKIEQMWSGSKNYPGILDRFTLVVPYCLDFLKWDLI
YDAELPMCAPDIIFGAEDETFHQFVARGGVDGEGNSKSPKNCLSDWNNKDPMRLMVLVQQ
LRDLYMSYQRRRVGEVDDDRLKFEISTIVSREGIEMHMSSGVEKPEEVKFSVPLLDMNLN
KMVPGCPWRHQQKIYLQVVYPVGKKYVSTPSPPRLKLLSTSELKTLFSIEEVKLPSWLDG
MCMAEYLPHLEESLEKQVLEAVSLIDVRRRFIEASALPFGRPIEADPVFCRRATFLAASG
VFTFLVHFFISTQFPKQQPTLMLQSSQHFNSQGAPIKSPHLNEYPWSPRWEPLQMAERIF
EFLVDEALSFKRYCNEAHHQH
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgagaacgtcccgcctctcatcgcggctcagctaaattacctcctcaaccat
tttccgcttcccgttaagattgagcagatgtggtccggcagcaaaaactaccctggaatt
cttgatcggttcactttagtcgtcccctactgtctagactttctcaaatgggatcttata
tacgatgcggagttaccaatgtgcgcacccgatattatatttggagcggaggatgagact
tttcatcaatttgttgcaaggggtggtgttgatggagaagggaattcaaagtctcccaag
aactgtttgagcgattggaacaacaaagaccctatgcggctaatggttcttgttcaacaa
ctcagggatctatacatgtcctaccagcggaggcgagtgggagaagttgacgacgataga
ttgaaatttgaaattagcacaattgtatctagagagggaatagaaatgcatatgagttct
ggtgttgaaaagccagaggaggtcaaattttcagtgcctctactggacatgaatttaaat
aagatggttcctggttgcccttggagacatcagcagaagatttacttacaggttgtatac
cctgttgggaaaaaatatgtttccacgccttctcctcctcgactaaaattactttcgact
tctgagttgaagactttattttctatagaagaggtcaaacttccttcatggttggacgga
atgtgcatggctgaatatcttccccatttggaagagtctcttgagaaacaggtcttagag
gcagtttccttaattgatgtcagaaggcgctttattgaggcatcagctcttccatttgga
agaccaatagaagctgatccagttttttgccggagggcaacatttcttgctgcatcaggc
gtattcacattcctggttcacttcttcatctctacccaatttccaaagcaacaaccaact
ctgatgcttcagagttctcagcatttcaactcccagggggcaccaatcaagtcgcctcat
ctgaatgagtatccttggagtccaagatgggaaccattacaaatggctgagcggattttt
gaatttttggtggatgaggctttgagctttaagaggtactgcaacgaggcacatcaccag
cactaa
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